Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0493 ATGGGTGGCGAAGAAGATCAATTGAGGAAGAAGGAAGAGTTTATGGAAGACGATGATTATGATGATGAAGTTGAACTTCCAGGATTTCGGTTTCATCCAACAGATGAAGAACTCGTTGGTTTCTATCTTCGAAGGCAGCTCGACAAGAAACCAATCAGAATCGAACTCATCAAGCAGATCGATATCTACAAATACGACCCTTGGGACCTTCCAAAGGCAGTGCAGGAAATCTGGACACTGTGTAGAATTTTCAAGAGAAATGTTCCACCGAGGAAGCACTTAACAGACTGGAGATCATCACAACACGCAGGTTGA 315 0.4317 MGGEEDQLRKKEEFMEDDDYDDEVELPGFRFHPTDEELVGFYLRRQLDKKPIRIELIKQIDIYKYDPWDLPKAVQEIWTLCRIFKRNVPPRKHLTDWRSSQHAG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0493 104 Gene3D NAC domain 34 77 IPR036093 GO:0003677|GO:0006355
Lele11g0493 104 SUPERFAMILY NAC domain 24 74 IPR036093 GO:0003677|GO:0006355
Lele11g0493 104 Pfam No apical meristem (NAM) protein 27 74 IPR003441 GO:0003677|GO:0006355
Lele11g0493 104 ProSiteProfiles NAC domain profile. 25 104 IPR003441 GO:0003677|GO:0006355
Lele11g0493 104 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0493 Lele-ChrLele11 4734609 4736442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0493 16 72 NAC Transcription Factor Family AT1G26870 66.667 1.08e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0493 NAM 2.7e-13 No_clan