Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0489 ATGGCTTCCATAACTCAGTTCTATTCAAATCAGAGTGGTTTCACTGACTTCAGCACTGCCAATCCAGTAAATGGATTGAATTACTCAGTTATGGAAGAAAATACAATGTGGCCTGATCATCGATATGGCTTGGTTCCATCACTCGATAGCAGTTTTGATACTGCTCTTCTTGATCATCATACTGTGTCACCGTCCATGCATTATTCCGACGCATGGTCACCGGCTTATCCTTTCACCGTGCCGGAAGTATCAGACATCCGGAGCCACCATAATAGCTTCTATGGCATTAACAACAATGAGGGGTTTAATCGGAGCTTGAGCAGTGGATTATTATACCAACAACCATATATTAATGGTGGCTTTGCAGATGAATGTTGTGTCTTCGTGGAGGACGTGAAGACTCTTGCTTGTCCTAAAGCTACTTCAACAGACAACTGGGGAGTTCAAGGGAATGATAATCAAGTGCTAGGAGGAGTTGATCAAGAGAACATTAAGGTGGGAAGATATTCGGAAGAAGAAAGGAAGGAAAGAATTCTGCGATATTTGAGGAAAAGAAACCAAAGGAACTTCAACAAAACAATCAAGTATGCTTGTCGGAAGACCCTAGCTGATCGGAGAGTGAGAGTCAGAGGAAGATTTGCCAGAAACAACGAGCTATGTGAAGATGAAATGACCGTGAAAAAGAAAATTGAGAATCTTCAACAAGACGACTTGTATGCTGCTGATGATACTATCCAGTTCCAGTTAAGGAATGAGGAAGAGGATTGGCTGCAAGAAGCCATGGAAAGTCTGGTGTTTCTATCTCATTCTTCATCACCAGATATATAA 828 0.4179 MASITQFYSNQSGFTDFSTANPVNGLNYSVMEENTMWPDHRYGLVPSLDSSFDTALLDHHTVSPSMHYSDAWSPAYPFTVPEVSDIRSHHNSFYGINNNEGFNRSLSSGLLYQQPYINGGFADECCVFVEDVKTLACPKATSTDNWGVQGNDNQVLGGVDQENIKVGRYSEEERKERILRYLRKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEDEMTVKKKIENLQQDDLYAADDTIQFQLRNEEEDWLQEAMESLVFLSHSSSPDI 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0489 275 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
Lele11g0489 275 Pfam CCT motif 174 216 IPR010402 GO:0005515
Lele11g0489 275 Coils Coil 216 236 - -
Lele11g0489 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 105 232 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0489 Lele-ChrLele11 4690746 4692265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0489 170 224 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 5.04e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele11g0489 CCT 2.3e-16 CL0281