Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0484 ATGGCCACTTCGCCATTGAAAAAGATCGAACTTGCCCACCAGCTGTACCGCCGGACGGTACGGCTACGCGCTAGGTTTCAAAAGGTCGCTTTGCATAGCAATAGAGCTGCTTGTTATCTGAAGCTTCACGATTTCAAGAAGGCTGCAGAAGAATGTACCTCAGTGCTTGAGCTAGATCAAGAGCACAGCAGGGCATTGATGCTGCGGGCTCAAACACTAGTCACCCTTAAGGAGTACCGTTCAGCACTTTTTGATGTCAACCGACTCTTAGAGTTGGATCCATCCTCAGAGTTAAATTCATTGCTCAGTTGGGTGATAAGAAAGTCGCTTGCTCCAATACCAGAATCAGAAGAGGAGTTTGAAGAACAGGAAGATGATGAAGATGAGGTGACAGTAAAAGGAGATAATAAATGGGAAAAATCCCCAGAGAAAGATGTTGGTAGAGATCAGAAAGATGAGCTTGACAAGGCTACTATTAATGCTGAAATAGACTCCAGGTTGTCATCTGGACAAAGAATAGACCAAAACCCTGAGCCAAAAACTTCCACACCAAAGACAATTGCGAAAGCACCAAAAGAGGAACGGCCTGAGAAACAAACCAAAGCATGGCAATCGATTCCAAAACCGAAAGGGCATTCAACTTTAAACTATGCACGTTGGGACAGTGTTGAAGATGATTCTAGTGAAGACGACAACAATGATGAAGATGAAGAAGGATCTCAGCCCCAGTACCGATTTCGTGTAAGAACCATAGGTGTACGATCGGTAAAATTAAGTGGGTTCATATATAGGATCAAGTATAGAGAGTGTTGCCAACAGTTGAAACTTGAGACCTATATACTGTATGGCCATGGAGATCCCCAGAGCACAAGATCTTCAATCATGGAATGGAAGCACCTACACCCACTTCACCAAATCGCAGATACCCCAACGCACAGGCTTCTCCTGAAACAATGGCTCAAAGAGGAAGATCTCATCCTCAGTCGAATCGCACTTAAAGAGACCCAAATCGACTCTGTTCGCAAGGAAATCACGATGCTTTACATCATCTTCTTCCTTTTCCACTCCACATCTCTCATGCTCCTCTTCAACACAGCTTCTGCGTCCAAACCCCACATGGAAAAGGCCTGTCACCGATCGTGGATCCCATATCTGTGCTCTCTGTTATTCTCTCTGGGGCTCATCTGGGCCGTGAGGTACAAGAGCGACGTGGAGTCCCACATGGAGAAGCTTCTGGATAGAGAGAAAGAGGACAGGAGCTTGTTGGGGAAGTGTGTGGAGGAGCTGAAGAAGAAAGGTATGGAGTTTGATTTGCTGAAAGAGGTTGATGCGTTGAGGAGGGCTAAGAGCTTAAGGGTTGAAGCTAAGGAGGTTCGAAAATGGTCTTCGAGGGACTTCGTGTCTCTGTTTTTCTTCACTCTGTCCTGTTTGTGTCTTGTAATCGCAAGGGTTATTTTGTGTAGTTAG 1467 0.4554 MATSPLKKIELAHQLYRRTVRLRARFQKVALHSNRAACYLKLHDFKKAAEECTSVLELDQEHSRALMLRAQTLVTLKEYRSALFDVNRLLELDPSSELNSLLSWVIRKSLAPIPESEEEFEEQEDDEDEVTVKGDNKWEKSPEKDVGRDQKDELDKATINAEIDSRLSSGQRIDQNPEPKTSTPKTIAKAPKEERPEKQTKAWQSIPKPKGHSTLNYARWDSVEDDSSEDDNNDEDEEGSQPQYRFRVRTIGVRSVKLSGFIYRIKYRECCQQLKLETYILYGHGDPQSTRSSIMEWKHLHPLHQIADTPTHRLLLKQWLKEEDLILSRIALKETQIDSVRKEITMLYIIFFLFHSTSLMLLFNTASASKPHMEKACHRSWIPYLCSLLFSLGLIWAVRYKSDVESHMEKLLDREKEDRSLLGKCVEELKKKGMEFDLLKEVDALRRAKSLRVEAKEVRKWSSRDFVSLFFFTLSCLCLVIARVILCS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0484 488 SUPERFAMILY TPR-like 7 97 IPR011990 GO:0005515
Lele11g0484 488 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Lele11g0484 488 MobiDBLite consensus disorder prediction 187 201 - -
Lele11g0484 488 SMART tpr_5 63 96 IPR019734 GO:0005515
Lele11g0484 488 SMART tpr_5 29 62 IPR019734 GO:0005515
Lele11g0484 488 MobiDBLite consensus disorder prediction 130 160 - -
Lele11g0484 488 MobiDBLite consensus disorder prediction 162 183 - -
Lele11g0484 488 MobiDBLite consensus disorder prediction 116 243 - -
Lele11g0484 488 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 257 - -
Lele11g0484 488 Gene3D Tetratricopeptide repeat domain 6 126 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0484 Lele-ChrLele11 4668343 4672680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0484 8 96 Calmodulin-binding Proteins AT3G25230 38.235 4.56e-12 66.2