Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0452 ATGTGTGTGGTCAGTAAACGTGTGATATTGTTGCTGCTTATTTTGGGGAACTTAGAGCAGTGGAGAACTACTTGTTTTGCACAAGTCACAAGAGACCATTTGAAGCCAGGTGACCAGCTAAATCACACAAATCCTGCTATATGCTCAGCAGGAGGCTCATATTGCTTGAAATTTATGACAATAGAGAATGACTACCACTTTTCTTATCTCGCAATCTTCAATGGATTCCTTGAATCGAGAGTCTGGATCGCCAACCGGAACGATCAAATTCTAGATGCTTCTTTAGAAGCTTTAACTTTGGATCATTCTGGAGTGTTGAAAATTACACACCAAGGTCAAGAGCCTACCATACTCTACTCTCCTCCTGCAGATCAGCCTCCAGATCTCATAAACAGCACTAATGCCACTTTATTGAAGACAGGCAACTTTGTGCTGCAACAACGTCACCCAAATGGATCAAACATTGTTTTGTGGCAAAGTTTTGACTATCCCACTGACACTCTTCTACCAGGAATGAGGTTAGGTGTTAACCATAAAACTGGAGAAAAATGGTCACTAGTCTCATACTTTCTTTCTACATCAGCTTCTCCAGGTCCCTTCTCACTGGAATGGGAACCCAGAACAGGCCAATTGATCATTCTGCGAAGAGGACAGGTTTATTGGGCAAGTGGGAAATTGATAAATGGCAAGTTTGAAAACTTACCAAAGGAAGCCCAAAGCTTTCACACTGGGCAGCTATTAGAAAGATCACTCGTGATTGCGAGTGCTGGTGACTGTTATGGTTATACCAGCAATGAAGGATGCCAGTTGCGGGATCAACCAGCTTGTAGGCACAAAGGTGAGTTCTTTGACCTCATGGATGTTAGGGTAAGAGATCAAGGCCTCACCTACAGCACAGAGAACAACGTGAGCTTGACCATAAGTGATTGCCTAGCCACATGCTGGAGCAACTGCAACTGTGTCGGATTCACTAGTTCTAATGATGATGCAACTGGATGTGTCCTTTATTTTGAGAATTCACAGATGAGTGTTCCTGAAGACAATAACTTACAACTTATATTCCTTGCTAATAGATCTGAGCCCATAGATAAAGGAGGCCCGGCACAGGCACCAAGTACAGGACAAAGTGACCAATATCAAGAATCAAATGCAAGTGCAAAAAGAATCAAATTACTTATTGCTGTCATTACCACCACTCTGTTCATTATATGCGCAATTCTATGGATACTACTAAGGAGAAGGAAAATCATGCTTCAAGGCAAGAAAAGAACAAAGATGGAGGATGAAAAGGGTACGAAAGAAACTTCAGAGGATGCTGCAAATTTGAACGAACTCCAAAACTATGAAAAGGATGGGCTTCGTTTAAAATTCTTTTGTTATGCATCTATCATGGAAGCTACTGATAGCTTCTCATCAAATAACAGGTTAGGACAGGGAGGCTTTGGACAGGTTTACAAGGGAAAATTGCATGATGGGAAAGAAGTGGCTATTAAGAAACTCTCAAGAAATTCAACCAAAAGCAAGCTACTGGATTGGAAGACACGTTTCAACATAATTGAAGGAATAGTTCAAGAATCAGAAGGAAACACAAACACCAGTAGAATTGTTGGTACATATGGATACATGCCCCCTGAATATATGATTAAAGGACTTGTCTCTACAAAATCAGATGTCTATAGCTTTGGAATCCTGATGCTTGAGATTGTATGTGGCAGAAGAAACAACAGCTTTCACTATGCATATGAACCACTTAACTTAGTGGGACATGTATGGGAACTATGGAAAGGGGGTGCAGCAACAGCACTAGAATTGATAGATCCAGCAATAAAAGATTCATTTGTTGAAGATCAAGTGATGAGATGCATTCATGTTGGTCTGTTATGTGCACAAGAGCGACCCTTTGATAGGCCCACCATGTCAGAAATTCTGTCATTGTTGACAAATGAAAGTTCAAAGCTTCCTTTGCTCCAGAGACCTGCATTCTGTTCCCTATATCATTCTAGTGCAGTTAATGAACCCGTCGATGATTCAGCCAATGGCTTGTCAATCTCCGATTTTTTTGCAAGATAG 2070 0.4111 MCVVSKRVILLLLILGNLEQWRTTCFAQVTRDHLKPGDQLNHTNPAICSAGGSYCLKFMTIENDYHFSYLAIFNGFLESRVWIANRNDQILDASLEALTLDHSGVLKITHQGQEPTILYSPPADQPPDLINSTNATLLKTGNFVLQQRHPNGSNIVLWQSFDYPTDTLLPGMRLGVNHKTGEKWSLVSYFLSTSASPGPFSLEWEPRTGQLIILRRGQVYWASGKLINGKFENLPKEAQSFHTGQLLERSLVIASAGDCYGYTSNEGCQLRDQPACRHKGEFFDLMDVRVRDQGLTYSTENNVSLTISDCLATCWSNCNCVGFTSSNDDATGCVLYFENSQMSVPEDNNLQLIFLANRSEPIDKGGPAQAPSTGQSDQYQESNASAKRIKLLIAVITTTLFIICAILWILLRRRKIMLQGKKRTKMEDEKGTKETSEDAANLNELQNYEKDGLRLKFFCYASIMEATDSFSSNNRLGQGGFGQVYKGKLHDGKEVAIKKLSRNSTKSKLLDWKTRFNIIEGIVQESEGNTNTSRIVGTYGYMPPEYMIKGLVSTKSDVYSFGILMLEIVCGRRNNSFHYAYEPLNLVGHVWELWKGGAATALELIDPAIKDSFVEDQVMRCIHVGLLCAQERPFDRPTMSEILSLLTNESSKLPLLQRPAFCSLYHSSAVNEPVDDSANGLSISDFFAR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0452 689 MobiDBLite consensus disorder prediction 421 437 - -
Lele11g0452 689 ProSiteProfiles PAN/Apple domain profile. 276 359 IPR003609 -
Lele11g0452 689 Gene3D Phosphorylase Kinase; domain 1 462 518 - -
Lele11g0452 689 ProSitePatterns Protein kinases ATP-binding region signature. 476 499 IPR017441 GO:0005524
Lele11g0452 689 Pfam Protein tyrosine and serine/threonine kinase 531 644 IPR001245 GO:0004672|GO:0006468
Lele11g0452 689 SMART blect_4 38 164 IPR001480 -
Lele11g0452 689 Pfam PAN-like domain 276 338 IPR003609 -
Lele11g0452 689 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 264 633 - -
Lele11g0452 689 Gene3D - 25 161 IPR036426 -
Lele11g0452 689 SUPERFAMILY Protein kinase-like (PK-like) 455 671 IPR011009 -
Lele11g0452 689 Pfam D-mannose binding lectin 81 188 IPR001480 -
Lele11g0452 689 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 225 IPR036426 -
Lele11g0452 689 ProSiteProfiles Bulb-type lectin domain profile. 31 158 IPR001480 -
Lele11g0452 689 MobiDBLite consensus disorder prediction 421 440 - -
Lele11g0452 689 Gene3D Transferase(Phosphotransferase) domain 1 519 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0452 Lele-ChrLele11 4446320 4449722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0452 458 661 Receptor kinase-like Gene Family AT4G11480 38.411 5.21e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0452 PK_Tyr_Ser-Thr 1.7e-07 CL0016