Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0451 ATGATTCGTCTTCTATCTACAGTCTCACGTCGTTTTGAGCTTTTCTCTATAGCCATTGCTGCTAAACCCTCGCAAGCATTCACTTCCACCACCTGTTCGACTAAATGTCTAGACCAAATCGAAGAGGCAGAGGAAGACAATACAGCTCAATCAGCAGACCCTGTTCAAGTTTTCAGGAAATGGGGTTGTAATGATGATGATTTGGCCAGAATTTTTAAACGTAACCCACAATTGTGCAAAGCTGATGTTACCCTGCTTCAATCGAATCTCTCTGTTCTTAGTCGCTTGGGGCTAAAAGCACCCGACTTGGTAAGGATAATCAATTGTAGGCCTAGGTTTCTTGTTACTAGACGGGTTCATCGTTGTTTTGATGAGAAGTTTGCATATCTTGATTCCTTATTTCAGTCGAAGGAATTGCTTAAGCGAGCCGTCGTGACCAACCCTACGCTCCTAATCTATGATTTTAACAACACCATTAAACCTGCTCTTGCACAATATCAAGAATTGGGTGTAAATAAAGAAGACTTTCTTGCCTTGATCTGTACCCGGCCCACAATTATTCCAAGGACTTCATTTGATGAGGAGAAGCTTGAATATATACACAAGACAGGGCTTTCCCAGAATTCAAAGATGTATAAATATGTGGTTGCAATAATCGGGGTCTCTCGTGTGGAAACAATTCGTGAGAAGTTAGCAAATTTTGCCAACTTTGGGTTCTCTGATGATGAGATATTTGAACTTATTAGGCGATCTCCTCTTGTCATGACACTATCAATCGAAAAGGTTCAGAGGACTATGGCGTTCATGTTGACCACAATGAAGTTTGATGCTAAAGCAGTTCTTGAAATGCCACGTCTCCTGTTTATAAACCTTGATAGATTGTTGAAGCCACGAGTTCTCCTTATAAGGAAGTTACAGGACATGGATGTTGAGTTAGAATTCACACAACGTTCAATAATTCGTGCTGTGAGGATGAGCGAGAATAGGTTTGTACATTTGTTCATTGAAAACCAGCCTAAGGAAGTTGCCAATGAGTTAATGGAGTTCTATAGGAAAGCAAAAGAATTTAAGACATTAGCAGGGTTAAGAAAGCGGTGTGTTCAAAAAGGCTTTCCATATTGA 1122 0.4037 MIRLLSTVSRRFELFSIAIAAKPSQAFTSTTCSTKCLDQIEEAEEDNTAQSADPVQVFRKWGCNDDDLARIFKRNPQLCKADVTLLQSNLSVLSRLGLKAPDLVRIINCRPRFLVTRRVHRCFDEKFAYLDSLFQSKELLKRAVVTNPTLLIYDFNNTIKPALAQYQELGVNKEDFLALICTRPTIIPRTSFDEEKLEYIHKTGLSQNSKMYKYVVAIIGVSRVETIREKLANFANFGFSDDEIFELIRRSPLVMTLSIEKVQRTMAFMLTTMKFDAKAVLEMPRLLFINLDRLLKPRVLLIRKLQDMDVELEFTQRSIIRAVRMSENRFVHLFIENQPKEVANELMEFYRKAKEFKTLAGLRKRCVQKGFPY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0451 373 FunFam Mitochondrial transcription termination factor family protein 123 344 - -
Lele11g0451 373 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Lele11g0451 373 SMART mt_12 277 311 IPR003690 GO:0003690|GO:0006355
Lele11g0451 373 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
Lele11g0451 373 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Lele11g0451 373 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Lele11g0451 373 PANTHER CGI-12 PROTEIN-RELATED 15 337 IPR003690 GO:0003690|GO:0006355
Lele11g0451 373 Gene3D Transcription termination factor 3, mitochondrial 46 117 IPR038538 -
Lele11g0451 373 Gene3D Transcription termination factor 3, mitochondrial 118 344 IPR038538 -
Lele11g0451 373 Pfam mTERF 56 129 IPR003690 GO:0003690|GO:0006355
Lele11g0451 373 Pfam mTERF 118 330 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0451 Lele-ChrLele11 4440446 4441567 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele11g0451 mTERF 1.4e-30 No_clan