Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0449 ATGCAAACCATGACGAACGATCCAGAACTGATGAGAAATTACAACAGTTCCTTCTTCCATGAAGAAACACTACCACCACCACCGCTAGATTATTATTCAGATCATGAAAGCTTCTTTTTCCTTAATAATAATAATAATCCAAACAGTTCACTGTTTGATTATTATTACCCTCCTCAATATCAAACACCACCACTGCTATTCTCTGACTATAACATTAGCATGTTCCCCAATGGTGATCAGAGCTTTCAATATCCCTGCCCTAATAAGCGCCATAAGCTAAGCTTAGAGGATGATTATCAGTTACCATATTGTAATGATAATTATTTCTGTGATGGGCTTGAAGATAATTTTTATCCTTACTGTTGTTCTTCGTTAATGCCGGAGTTTAATGATATTGGGGGAGTTCCGCCGTCGCTGCAGCTTCCGGTGGTGGCGGGGGCTGAGAGGACTGTGTCGGCGCAGGGCGTGGTGGCGAGAGAAAGGAGGAAGAAGATAGCGGAGAAGATGCAGGAGCTGGGGAAGATGGTGCCAGGTGGGAGTAAGATGAACACAGCTGAGATGCTTCTTGCAGCTTCCAAGTATGTGAAATACTTGCAAGCCCAAGTTTCCATGCTTCAGCTTATGAACACTCTCACGGAAGATAAAGACTCAACTGGGAGTGATAATGAAGATGAACAATTACAAGCAATGCTTGGCAGTGCTAGTGTTGAAGAGAAGCTCTACTTGCAGGAGAAGTGTTTGGCCCCACAACACTTGGTCACCACATTGACAAATCATTCTGACATCCAAACAAAACCTTCCATTCTCAAAAATCTTAATGAGCTCATCATTGTCACAGACACTGATCACAAGAAGAAACAGCTCCAATAA 870 0.4264 MQTMTNDPELMRNYNSSFFHEETLPPPPLDYYSDHESFFFLNNNNNPNSSLFDYYYPPQYQTPPLLFSDYNISMFPNGDQSFQYPCPNKRHKLSLEDDYQLPYCNDNYFCDGLEDNFYPYCCSSLMPEFNDIGGVPPSLQLPVVAGAERTVSAQGVVARERRKKIAEKMQELGKMVPGGSKMNTAEMLLAASKYVKYLQAQVSMLQLMNTLTEDKDSTGSDNEDEQLQAMLGSASVEEKLYLQEKCLAPQHLVTTLTNHSDIQTKPSILKNLNELIIVTDTDHKKKQLQ 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0449 289 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 209 IPR036638 GO:0046983
Lele11g0449 289 Pfam Helix-loop-helix DNA-binding domain 159 199 IPR011598 GO:0046983
Lele11g0449 289 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 154 251 IPR045843 GO:0003700|GO:0006355
Lele11g0449 289 SMART finulus 157 204 IPR011598 GO:0046983
Lele11g0449 289 Gene3D - 149 218 IPR036638 GO:0046983
Lele11g0449 289 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0449 Lele-ChrLele11 4424398 4427042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0449 148 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 45.736 1.09e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele11g0449 HLH 9.8e-07 No_clan