Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0446 ATGATAACGGATGTTACGGCGTCCACTTTTGTGGTCAATCGCTTTACATTAAGGTTGTGTTTTGGAAAGACGAAGATGGACCCTAGATATGATGGCTTCCAGCCTGTGCCACAGTCTGTGATGCAGGACCATCTGGATGGCGTGCATACTAGTAGGGAATCATATGCCCCTAATACATCTGAAGTTAGACCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTGCATTTGAATTTATGCGCGATAGGGTGAAACTTAGGAAGCCTGTAATTCCTAATGTTGGTGATCCCAAATCTGCAACAGGTCATAATAGTCGTGCAGGATGTGAAAGTGGATCGGATATGTTTTCGCGTGAAATGGTTGGCAGGGATCCAAAAGAGTATGATGGAAAGGATACATTGTTACATGGAGGCAGATGCAATTATGCATCAATTCAATCAATTCCAAGAACTTCATATAATCAGGAAAATGGTCGATCTTTGCATGGGTATGCCTCTTATGGAAGTTCTGATAGCTCACCAACGACAATGAAAGTTCTTTGTAGCTTTGGTGGTAGAATATTACCACGACCTGGTGATGGAAAACTTAGATATGTTGGAGGTGAAACACGCATTATCCGAATAAGAAAGGACATATCTTGCCAGGAGCTTATTCAGAAATCATTGTCGATATATAATCAAACTGATGTAATTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCTGATGAAGATTTGCAGAATATGATGGAGGAATGTAATCATCCACAAGATAGAGAAGGATCACAAAAGCTTAGAATTTTTTTATTCTCTATGAGTGATTTGGATGATGCTCATTTTGGTCTCAGTAGTGTGGGTGATGATTCTGAAGTTCAGTATGTTGTTGCTGTTAATGGCATGGACTTTGGTTCAAGAAACAACTCAGTGCTTCTTGGTGCGAGCTCTTCAGCAAATGATATACATGAATTGGACAGGCAAAATGCTGAGAGGGAAGTTGGGAAAGTTCCTGTAGAATCTATATGTATCAGCAACGCTCCATTGACTGGGAATTATGACTCATCATCGACCATTCAGTCTTCAAAACCAATGCTTCCAACTTCCTCAATTGCTTATGAAACCTATCCACTCTACAGAGACCAGATGATGCATCTTGGGGAGGCTTTTAGTCAATATCCTATTCACCATGGCCTTAATCCTTCTCAAAACTTTACTCTCGTAGAGACTTCTAATGCTATGCCTCCTCATGGGATGATAAATCAACAAGGGATTTTGAATGAAGGTTCTTCTCCTAATGGATTACAAGTACAGAATTTGGAAATACCGGCAATGCTGGTGAAAAAAATGGGTGATAGTTCAGTTCCACAAGGAAGTAACCCTGCAAAAGTTCTATCCTCAGAAACACCATCCCCTGTTCCCACACAACCAAAAGATGATTTCTTGAAAAATAATGTTAATAAAGCCACAGTTGCAGTTAACATACCTGAGGAGAAACTACCCACACTGCCATCAATGAAAATTGAGCAGCAACAGGAGTATAAAGAGGCCTCTCCCTCATCTAGCAGTGCATTTGGTCCTGGTAATGTTGATTTTCAATCCAATGGGATTGATTTAAGTTGCCTTCACCCTCCTCCAATGCCTAAAAGAGTTTACTATTCTTATTCTGAAAGAACTCCTAGGGAGCAGGTAGAATTGCTGAATCGGTCTGCAAAGTCAGATGACACATATGATTCTCAGTTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCAGTATTCAGTCACAGAATCTGGTGACAACTTGCACAACAGAAATCAGTCTAATTTAACAGAGGATTCAAGTGCCGCATCAAAACCACTGTATGTGGATGGCAGCATCGTTGTTAATGGGCTTAATGAACTGCAGATGCACAAACTATCTCCTGAGACGAGAAATAAGATAAAGCCAAAACTCTCAGACCATGTGGATGTGGAGTTGAAGCCGGTATTACCAAAAAATGAGGGAAGTAAAGTGGTGGTAAATGAGGATCAGGTCATCAGGTCCGATACTGATAGTTATTTTGAAGATAACCACAGCAAACCCCTGGTTGATGAAAACAAAAACCTCAAATCAGATTTTTCTGCTTTGGATCAGGTTCCCACTTTTAAGCACAATGATGGCCCAACATCTCATCTTCCAGAGATTAATTGGGTTCATGGCTTAGGGAAGGAATCAAACAATGATTGTAATGTGCAAGAAGTACCTGTTTCTTTGACTGGTAACACAACTGAAGACATTTCTCAAGGTTTAACACCAAATGCTCTTCCCAAACAAGAACAGGCTGACATTCTTATTGATATTGATGATCGATTTCCTCGTGAACTGCTCTCTGATATGTATACTAAAGCAGTACTTGCGGAAGATCCATCCAGTCTACATCCACTAACTAATATTGGAGTGGGCATAAGCATAAACATGGAAAACCATGAGCCTAAGTCATGGTCATATTTTGGGAAATTGGCACAAGAAGGGCTAGATAACATCTCTCTTATTGACCGGGATCCTCTTGGTTTTTCACCTGAATCTGGAAATGTAGATGATAGAACTCACCTTGTCACGCCGCTAACACCTGATGAAATATCTGTAAACCAAGCAGATTTGCATCTCAATTTTGATGGAGAAAGTCAAAAGGGTTTTCATGGAATAGTTGGAACCGAAACCACTTTTGTGCAGTCTAATTATGATCATTCCCAAGTGAAAGAGACCGAAAGTATGCAGTTTGATGCTACAGTGGAGAATTCAAGAGGTCAAGAGTCAGAATTTGAGGATGGGAAGTTCGAAACAAGAAATAGCGGTCTACCTCCCCTTGATCCTTCTCTGGGAGGTTTTGATATCAATTCCTTACAGGTCATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCTGGGACCTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGATTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCGAATGTTCTGGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAATACATGGTGGATGGCTCTCTTAGGCATGATTCAACCATGATTTTTTATTACAGGTATGTTGATCGTCGCAAGAGGCTGATGATTGCCATGGATGCAGCATTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGACCCTGTGAGGCCAATTTGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGAAATACATTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAATAATACATTACGGCCAACAATACCAAGTTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGTCAGGCCTTCCTTCACAGAAATTGCCAGTCGCTTAAGGGTTATGTCTGCTTCTGCTTCCCAAACTAAATCACAGCTTAACAAGCCAGCCAAATGA 3783 0.4103 MITDVTASTFVVNRFTLRLCFGKTKMDPRYDGFQPVPQSVMQDHLDGVHTSRESYAPNTSEVRPVLNYSIQTGEEFAFEFMRDRVKLRKPVIPNVGDPKSATGHNSRAGCESGSDMFSREMVGRDPKEYDGKDTLLHGGRCNYASIQSIPRTSYNQENGRSLHGYASYGSSDSSPTTMKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRKDISCQELIQKSLSIYNQTDVIKYQLPGEDLDALVSVSSDEDLQNMMEECNHPQDREGSQKLRIFLFSMSDLDDAHFGLSSVGDDSEVQYVVAVNGMDFGSRNNSVLLGASSSANDIHELDRQNAEREVGKVPVESICISNAPLTGNYDSSSTIQSSKPMLPTSSIAYETYPLYRDQMMHLGEAFSQYPIHHGLNPSQNFTLVETSNAMPPHGMINQQGILNEGSSPNGLQVQNLEIPAMLVKKMGDSSVPQGSNPAKVLSSETPSPVPTQPKDDFLKNNVNKATVAVNIPEEKLPTLPSMKIEQQQEYKEASPSSSSAFGPGNVDFQSNGIDLSCLHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQFPVSDLLSDINPQYSVTESGDNLHNRNQSNLTEDSSAASKPLYVDGSIVVNGLNELQMHKLSPETRNKIKPKLSDHVDVELKPVLPKNEGSKVVVNEDQVIRSDTDSYFEDNHSKPLVDENKNLKSDFSALDQVPTFKHNDGPTSHLPEINWVHGLGKESNNDCNVQEVPVSLTGNTTEDISQGLTPNALPKQEQADILIDIDDRFPRELLSDMYTKAVLAEDPSSLHPLTNIGVGISINMENHEPKSWSYFGKLAQEGLDNISLIDRDPLGFSPESGNVDDRTHLVTPLTPDEISVNQADLHLNFDGESQKGFHGIVGTETTFVQSNYDHSQVKETESMQFDATVENSRGQESEFEDGKFETRNSGLPPLDPSLGGFDINSLQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLIVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHDSTMIFYYRYVDRRKRLMIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSSCDAEWRTLMEQCWAPNPAVRPSFTEIASRLRVMSASASQTKSQLNKPAK 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0446 1260 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 969 1063 - -
Lele11g0446 1260 MobiDBLite consensus disorder prediction 597 623 - -
Lele11g0446 1260 Gene3D Transferase(Phosphotransferase) domain 1 1075 1260 - -
Lele11g0446 1260 ProSiteProfiles Protein kinase domain profile. 976 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0446 1260 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1064 1258 - -
Lele11g0446 1260 Pfam Protein tyrosine and serine/threonine kinase 977 1241 IPR001245 GO:0004672|GO:0006468
Lele11g0446 1260 MobiDBLite consensus disorder prediction 597 622 - -
Lele11g0446 1260 PRINTS Tyrosine kinase catalytic domain signature 1058 1071 IPR001245 GO:0004672|GO:0006468
Lele11g0446 1260 PRINTS Tyrosine kinase catalytic domain signature 1212 1234 IPR001245 GO:0004672|GO:0006468
Lele11g0446 1260 PRINTS Tyrosine kinase catalytic domain signature 1168 1190 IPR001245 GO:0004672|GO:0006468
Lele11g0446 1260 PRINTS Tyrosine kinase catalytic domain signature 1097 1115 IPR001245 GO:0004672|GO:0006468
Lele11g0446 1260 Pfam PB1 domain 194 277 IPR000270 GO:0005515
Lele11g0446 1260 SMART PB1_new 192 279 IPR000270 GO:0005515
Lele11g0446 1260 ProSitePatterns Protein kinases ATP-binding region signature. 982 1007 IPR017441 GO:0005524
Lele11g0446 1260 MobiDBLite consensus disorder prediction 91 117 - -
Lele11g0446 1260 SUPERFAMILY CAD & PB1 domains 194 282 - -
Lele11g0446 1260 SMART serkin_6 976 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0446 1260 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 197 279 - -
Lele11g0446 1260 MobiDBLite consensus disorder prediction 514 534 - -
Lele11g0446 1260 SUPERFAMILY Protein kinase-like (PK-like) 966 1240 IPR011009 -
Lele11g0446 1260 Gene3D Phosphorylase Kinase; domain 1 969 1064 - -
Lele11g0446 1260 Gene3D - 196 279 - -
Lele11g0446 1260 CDD PB1_UP2 181 277 - -
Lele11g0446 1260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1103 1115 IPR008271 GO:0004672|GO:0006468
Lele11g0446 1260 CDD STKc_MAP3K-like 982 1241 - -
Lele11g0446 1260 MobiDBLite consensus disorder prediction 458 489 - -
Lele11g0446 1260 PANTHER SERINE-THREONINE PROTEIN KINASE 222 1242 - -
Lele11g0446 1260 MobiDBLite consensus disorder prediction 456 489 - -
Lele11g0446 1260 MobiDBLite consensus disorder prediction 933 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0446 Lele-ChrLele11 4404008 4413258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0446 21 680 MAP Kinase Kinase Kinase AT1G16270 37.103 1.99e-88 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele11g0446 PK_Tyr_Ser-Thr 9.6e-58 CL0016