Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0444 ATGTGGTATATTTATACAGTCATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCTGGGACCTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGATTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCGAATGTTCTGGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAATACATGGTGGATGGCTCTCTTAGGCATGTATTACTTCTCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATAGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGACCCTGTGAGGCCAATTTGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGAAATACATTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCAATATGGTGCAATCATAGGTGGGATTGTAAATAATACATTACGGCCAACAATACCAAGTTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGTCAGGCCTTCCTTCACAGAAATTGCCAGTCGCTTAAGGGTTATGTCTGCTTCTGCTTCCCAAACTAAATCACAGCTTAACAAGCCAGCCAAATGA 888 0.4257 MWYIYTVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLIVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLLKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMQYGAIIGGIVNNTLRPTIPSSCDAEWRTLMEQCWAPNPAVRPSFTEIASRLRVMSASASQTKSQLNKPAK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0444 295 CDD STKc_MAP3K-like 19 276 - -
Lele11g0444 295 Gene3D Transferase(Phosphotransferase) domain 1 101 295 - -
Lele11g0444 295 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 6 100 - -
Lele11g0444 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lele11g0444 295 PRINTS Tyrosine kinase catalytic domain signature 247 269 IPR001245 GO:0004672|GO:0006468
Lele11g0444 295 PRINTS Tyrosine kinase catalytic domain signature 95 108 IPR001245 GO:0004672|GO:0006468
Lele11g0444 295 PRINTS Tyrosine kinase catalytic domain signature 132 150 IPR001245 GO:0004672|GO:0006468
Lele11g0444 295 PRINTS Tyrosine kinase catalytic domain signature 203 225 IPR001245 GO:0004672|GO:0006468
Lele11g0444 295 SUPERFAMILY Protein kinase-like (PK-like) 3 275 IPR011009 -
Lele11g0444 295 ProSiteProfiles Protein kinase domain profile. 13 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0444 295 ProSitePatterns Protein kinases ATP-binding region signature. 19 44 IPR017441 GO:0005524
Lele11g0444 295 SMART serkin_6 13 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0444 295 Gene3D Phosphorylase Kinase; domain 1 6 100 - -
Lele11g0444 295 PIRSF ILK 3 292 - -
Lele11g0444 295 Pfam Protein tyrosine and serine/threonine kinase 14 276 IPR001245 GO:0004672|GO:0006468
Lele11g0444 295 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 101 293 - -
Lele11g0444 295 PANTHER SERINE-THREONINE PROTEIN KINASE 9 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0444 Lele-ChrLele11 4391507 4394562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0444 7 295 MAP Kinase Kinase Kinase AT1G16270 85.911 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele11g0444 PK_Tyr_Ser-Thr 1.7e-62 CL0016