Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0443 ATGATGGAACAACCTGGAATGCAGAAACAGCAACAGTACAATACCATGGAACCTAGAAATGAGGAAATCCATTCTGCACCACAGTCTACCGTGCAGGACCGTCTGGAAGGCATGCTTATCAATATGAGGCCTGCAGACCGTAATATGTCAGATAAAAAACCTGTACTTAATTACTCCATCCAGACTGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCATGGGTGATCCCAATTATGCAACAGGTTATATGGAATTGGAGGGTATTTTAGGCATTAGCCATTCAGGATCTGAAAGTGGCTCAGATATTTCCAGGCTTCCAAAAGTTGAAAAAGGTCCCAAGGAATTTGACAGAAGAAGCTCGTCTTTGCAACGGGAAAGACGCAATTATGGGTCAGTTCGATCAATCCCTAGAACTTCATCTAGTCAAGAAAATAACCGAGTCCTTCATGGTCTTTCTCCTTCTGGAGCTTCTACCGGCTCATCAATGAAGATGAAGGTTCTTTGTAGTTTTGGTGGTAAAATACTGCCACGCCCCAGTGATGGAAAGCTTAGACATGTTGGAGGTGAAACGCGTATTATTTCTATCAGAAAGGACATAAGTTGGCAGGAGCTTATGCAGAAAGCCTTATCACTCTATAATGAAACTCATGCTATAAAGTATCAGCTCCCTGGGGAAGATCTTGATGCCTTGGTTTCTGTATCTAGTGATGAGGATCTGCGAAATATGATGGAGGAATGCCATGATCTAGAAAACAGAGAAGGATCACAAAAACTTAGGATGTTTCTGTTTTCCATGATTGATATGGATGAACCTAGTGTTGATGGGGATACGGAAATCCAGTATGTAGTGGCTGTTAATGGCATGGACTTGGGATCAAGGAACCATTCAGTCCTTCAGGTTGCAAGCTCTTCTGCTGATAATTTACATGAACTAGATGGACAGAATATTGAGGCCAGTAGAACTCATATAGAATCAACTGGAGCCCCTAGTTCTTCCTTGACTGCCAATGCTAACTCATCATGGGGAATTCAGTCTTCGCAACCAACGATTCCAACTGCCTCAAGTGCTTGCCATCATGGGGAAACCAGTCAATATCCAGTGCACTATGGTGTTGATTCTTCTAACTCAGGTTTTAGACAGATTCCAGTTTCTGTGCCTACACATGTTACTAACAATCAAGGAATTATCAGTGAAGGGCATCAACCCGAAGTGTTGCAGGTGCAAAATCCAGAAGTTCCAGCAATGCAGGTAAGGAAAACGGGCGATAGTTCCATTAGGCATGAAAGTGACTCTGGGAAAGGCTTATCAGAAACACCATATCCTGTTCCTCCACAACCGGTTGATGGAAATTTACCCGGTAATTTTTCCGAAGCATCAGTCACAAATGCTGTACCAGGGGTGCACCTTCCTAAAGTGCCTTCAAAAAGCAAGGCCAAGCATCAGCATTATGAGGAGGCCTCTTCATTGGCTAATGCAGTGAATTCCACACAGATTCCGAAGTCTGGTGAAGATGACTTCTATTCCACCTCTACTAATGCTTTCAATCCTTCTTATATTGATGCTGGTTCCAATGTTATTGATTTGAGTTGCCTTGAGCCACTTCCCACCAGAGTTTATTATTCAGAGAGAATTCCTAGAGAGCAGGCAGATTTGCTGAACCGATCCACAAAGTCAGATGATGCGCATGGTTCTCAGGTTCTCATGTCTGATTTACTCTCTGACTTCAACCAACAGAATTCAACTACAGAATCAAGTGATAATTTTCAGGTTGAAAATCTGTCAAATTGGAATGCAGGGTCAAGCACGACAGCAAAACCATTGAATACAAATGTCCATGCTATTGGCAATGGGCTTGCCCAGCTACAAATTCAAAAACAGTTGCCAGATGCAAACAACACAGATACTAAAGTTGCTGCAAATGAGGATCAGATCCTTAGATCTGAAAGTGAAACCAATTTATCCAAACATAACCATAACAATCGCCCAATTGATGAAACCAACAGCACTGAACATCCTGCATTTTACAAGGTTCCATCTGACCGTAATTTGGGCGATGCTTCTAACAAAGAAGCCAGTAATGAGTCTAAGGTTCAACCACAGCCCGTTTCTTTAACTGGAAAAGTTAGCCAAGATGTTTCTCAAGGTTTACCCTCAGATGCTGTTTCCACGCCTGCTCAAGGTGATATTATAATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAGGCAATAGTCTCTGAAGATTCCTCGCGTATTAGTCCATTGCCAACTGATGGAACAGGCTTGAGCTTAAATGTGGAAAATCATGAGCCAAAGCATTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTTTGATAATGTGTCTCTAATTGATCAAGATCATATAGGTTTTTCATCTACAATAAGAAAAGCACAAGAAGGAGATAGTAGATCTCAGCAAGTTGCACCCCTGCCAGTCGATGGAGTTTCAGTAGGCCGCGATTTTGGTAAAGAAAATCAGAAAAAATTGCCCGTAACAACTAGAGCAGAGGCCACTGTTCCACATCCAAACTATGATCAAACCCAAGTTATTGAGACTGAAAACAAGATTTTGGATCCAGTAAAGGGAAACACAAGAGTAGAAGACTCTGAATATGAGGATGGCAAGAATGAAGCAGGGAATATTAGTCATCTGCATGATCGTTCTGTGGATGATATTGACATCAGTACTTTGCAGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGAACCTTTGGAACTGTATACCATGGAAAATGGAGGGGAACAGATGTTGCCATCAAAAGAATAAAGAAAAGCTGCTTCTCGGGTAGATCTTCAGAACAAGAGAGACTGACTGTAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCACCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGACGGGCCCGGAGGAACACTAGCTACTGTCACAGAGTTCATGGTAGATGGTTCTCTACGGCATGTTTTGCTTCGTAAGGATAGGTATTTAGATCGCCGCAAGAGGCTGATAATCGCCATGGATGCAGCTTTCGGAATGGAGTATTTGCACGCAAAAAATATTGTGCATTTTGATTTGAAATGTGACAATTTGCTTGTAAACTTAAAGGATCCTTTGCGACCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAGCGAAATACCCTGGTTTCTGGTGGTGTGCGGGGAACTCTACCTTGGATGGCACCTGAACTTTTGAATGGCAGCAGCAATAAAGTCTCAGAGAAGGTTGACGTGTTCTCGTTTGGCATTGTGTTATGGGAGATTCTTACAGGTGAAGAACCATATGCTAATATGCACTATGGTGCAATTATAGGAGGATTTGTAAATAACACATTAAGGCCAACAATCCCAAGTTATTGTGATGCTGAGTGGCGGCAACTAATGGAGCAGTGTTGGGCACCTAACCCTTCAGCCAGGCCATCATTCACCGAAATTGCTCGCCGCTTAAGGGTGATGTCAGCAGCTGCTAGTCAGACTAAAGGGCAAGGCTATAAGGCATCTAAAATGATTGTTCAATAG 3660 0.4235 MMEQPGMQKQQQYNTMEPRNEEIHSAPQSTVQDRLEGMLINMRPADRNMSDKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIMGDPNYATGYMELEGILGISHSGSESGSDISRLPKVEKGPKEFDRRSSSLQRERRNYGSVRSIPRTSSSQENNRVLHGLSPSGASTGSSMKMKVLCSFGGKILPRPSDGKLRHVGGETRIISIRKDISWQELMQKALSLYNETHAIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLENREGSQKLRMFLFSMIDMDEPSVDGDTEIQYVVAVNGMDLGSRNHSVLQVASSSADNLHELDGQNIEASRTHIESTGAPSSSLTANANSSWGIQSSQPTIPTASSACHHGETSQYPVHYGVDSSNSGFRQIPVSVPTHVTNNQGIISEGHQPEVLQVQNPEVPAMQVRKTGDSSIRHESDSGKGLSETPYPVPPQPVDGNLPGNFSEASVTNAVPGVHLPKVPSKSKAKHQHYEEASSLANAVNSTQIPKSGEDDFYSTSTNAFNPSYIDAGSNVIDLSCLEPLPTRVYYSERIPREQADLLNRSTKSDDAHGSQVLMSDLLSDFNQQNSTTESSDNFQVENLSNWNAGSSTTAKPLNTNVHAIGNGLAQLQIQKQLPDANNTDTKVAANEDQILRSESETNLSKHNHNNRPIDETNSTEHPAFYKVPSDRNLGDASNKEASNESKVQPQPVSLTGKVSQDVSQGLPSDAVSTPAQGDIIIDIEDRFPRDFLYDMFSKAIVSEDSSRISPLPTDGTGLSLNVENHEPKHWSYFQKLANEGFDNVSLIDQDHIGFSSTIRKAQEGDSRSQQVAPLPVDGVSVGRDFGKENQKKLPVTTRAEATVPHPNYDQTQVIETENKILDPVKGNTRVEDSEYEDGKNEAGNISHLHDRSVDDIDISTLQQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFSGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGFVNNTLRPTIPSYCDAEWRQLMEQCWAPNPSARPSFTEIARRLRVMSAAASQTKGQGYKASKMIVQ 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0443 1219 Pfam PB1 domain 193 276 IPR000270 GO:0005515
Lele11g0443 1219 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 196 278 - -
Lele11g0443 1219 ProSiteProfiles Protein kinase domain profile. 933 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0443 1219 MobiDBLite consensus disorder prediction 662 678 - -
Lele11g0443 1219 MobiDBLite consensus disorder prediction 107 171 - -
Lele11g0443 1219 CDD STKc_MAP3K-like 939 1196 - -
Lele11g0443 1219 Gene3D Phosphorylase Kinase; domain 1 926 1020 - -
Lele11g0443 1219 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1021 1213 - -
Lele11g0443 1219 SMART serkin_6 933 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0443 1219 MobiDBLite consensus disorder prediction 430 456 - -
Lele11g0443 1219 Gene3D Transferase(Phosphotransferase) domain 1 1021 1218 - -
Lele11g0443 1219 MobiDBLite consensus disorder prediction 116 137 - -
Lele11g0443 1219 MobiDBLite consensus disorder prediction 698 734 - -
Lele11g0443 1219 ProSitePatterns Protein kinases ATP-binding region signature. 939 964 IPR017441 GO:0005524
Lele11g0443 1219 PANTHER SERINE-THREONINE PROTEIN KINASE 228 1197 - -
Lele11g0443 1219 CDD PB1_UP2 180 276 - -
Lele11g0443 1219 MobiDBLite consensus disorder prediction 138 171 - -
Lele11g0443 1219 PRINTS Tyrosine kinase catalytic domain signature 1167 1189 IPR001245 GO:0004672|GO:0006468
Lele11g0443 1219 PRINTS Tyrosine kinase catalytic domain signature 1015 1028 IPR001245 GO:0004672|GO:0006468
Lele11g0443 1219 PRINTS Tyrosine kinase catalytic domain signature 1123 1145 IPR001245 GO:0004672|GO:0006468
Lele11g0443 1219 PRINTS Tyrosine kinase catalytic domain signature 1052 1070 IPR001245 GO:0004672|GO:0006468
Lele11g0443 1219 MobiDBLite consensus disorder prediction 662 734 - -
Lele11g0443 1219 Pfam Protein tyrosine and serine/threonine kinase 934 1196 IPR001245 GO:0004672|GO:0006468
Lele11g0443 1219 SMART PB1_new 191 278 IPR000270 GO:0005515
Lele11g0443 1219 MobiDBLite consensus disorder prediction 335 372 - -
Lele11g0443 1219 SUPERFAMILY CAD & PB1 domains 192 277 - -
Lele11g0443 1219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1058 1070 IPR008271 GO:0004672|GO:0006468
Lele11g0443 1219 SUPERFAMILY Protein kinase-like (PK-like) 921 1195 IPR011009 -
Lele11g0443 1219 Gene3D - 195 278 - -
Lele11g0443 1219 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 926 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0443 Lele-ChrLele11 4377658 4383188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0443 14 1125 MAP Kinase Kinase Kinase AT1G79570 45.008 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele11g0443 PK_Tyr_Ser-Thr 2e-62 CL0016