Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0442 ATGTTAATGTGCAGGCTCACTGTTACAGTCATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCTGGGACCTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGATTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCGAATGTTCTGGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAATACATGGTGGATGGCTCTCTTAGGCATGTATTACTTCTCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATAGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGACCCTGTGAGGCCAATTTGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGAAATACATTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCAATATGGTGCAATCATAGGTGGGATTGTAAATAATACATTACGGCCAACAATACCAAGTTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGTCAGGCCTTCCTTCACAGAAATTGCCAGTCGCTTAAGGGTTATGTCTGCTTCTGCTTCCCAAACTAAATCACAGCTTAACAAGCCAGCCAAATGA 897 0.4292 MLMCRLTVTVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLIVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLLKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMQYGAIIGGIVNNTLRPTIPSSCDAEWRTLMEQCWAPNPAVRPSFTEIASRLRVMSASASQTKSQLNKPAK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0442 298 PRINTS Tyrosine kinase catalytic domain signature 250 272 IPR001245 GO:0004672|GO:0006468
Lele11g0442 298 PRINTS Tyrosine kinase catalytic domain signature 135 153 IPR001245 GO:0004672|GO:0006468
Lele11g0442 298 PRINTS Tyrosine kinase catalytic domain signature 98 111 IPR001245 GO:0004672|GO:0006468
Lele11g0442 298 PRINTS Tyrosine kinase catalytic domain signature 206 228 IPR001245 GO:0004672|GO:0006468
Lele11g0442 298 Gene3D Transferase(Phosphotransferase) domain 1 104 298 - -
Lele11g0442 298 Pfam Protein tyrosine and serine/threonine kinase 17 279 IPR001245 GO:0004672|GO:0006468
Lele11g0442 298 SMART serkin_6 16 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0442 298 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 9 103 - -
Lele11g0442 298 ProSitePatterns Protein kinases ATP-binding region signature. 22 47 IPR017441 GO:0005524
Lele11g0442 298 CDD STKc_MAP3K-like 22 279 - -
Lele11g0442 298 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 104 296 - -
Lele11g0442 298 SUPERFAMILY Protein kinase-like (PK-like) 7 278 IPR011009 -
Lele11g0442 298 PIRSF ILK 7 295 - -
Lele11g0442 298 ProSiteProfiles Protein kinase domain profile. 16 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0442 298 PANTHER SERINE-THREONINE PROTEIN KINASE 12 280 - -
Lele11g0442 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Lele11g0442 298 Gene3D Phosphorylase Kinase; domain 1 9 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0442 Lele-ChrLele11 4374568 4377601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0442 8 298 MAP Kinase Kinase Kinase AT1G16270 85.324 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele11g0442 PK_Tyr_Ser-Thr 1.7e-62 CL0016