Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0436 ATGGGAAGTAGTGGAGCCAATGGAAGTTTTGAAATGGCCTGCACAGTGCCACACAGGATTGAGGATGCAGAAGCTGACAGGCTCCACCGCTCTCTCACCGATCCCACAGCAATACGCAAAGAGCCTGTTGATGATTGGGTTTCATTTGAAGTTGATACTGATGGCTTCTTTCATTTCACCCTAATTCCAAGTAACAGTGAGAATGCTGATCGGCCTCGTGTGAAAAGAGGACGCAAAAGAAAGAACCCCAGTCTTAATCAAAGCAATAATTCATCATCTTCTTCCAACTCAGAAGCACCACCCCGTGCTATAGGCCTTGATGGATCGGTGCCGGAGGGCGATTGGTTCTGTCACAATTGCTCTGGAGAAGTTGACAACCTTTCAGATTCAACAGTAAATCCTAAGAGAAGACGACGAGGTTATCTGAAAAGAGCATGCAAAGTCCCTTCCGGATGTTGCTTGTGTTCAACAATCCCCAAGAAATTAATCCCCGATGAGAATGCCTTCTTTTCCTTTAAAACCAAGTCAAATCATCAGTCCAACTTATCAGCTCGTAATGATGATGATGGCGTTGGTGGTACTCACATCCAACACAACAACAACAATGGAGATAAACGTTCCGTCCTAAGAGGAGGACAACATGGGAAGAGAACTAGCAAGGGGCCTACCGTGGCTTCTCAACAAAGGCAACCTGCAGGCCTAGCTGTGGTATTACACGGAGAAAATCTTAACCAGGAAGAAGTAGCAGCTGGAAGAGCTGCAGCTGAGGAAGCTCCGCGTAATAAAGCAAGAGAAACTCCATGGACTGAGGATGAGGTTGATGCTTTGTGGGTTGGTGTTCGGAGGCATGGTCCTGATAATTGGGACACAATTCTGAATGATAAAAAGCTCAGAGTTTTTCAACTTTGTAAGAAAACCTCTCATGATCTCTCCATGAGATGGCAAAAAGAGCTTGAAATTATGTACTCCATTGTCAAAACATCAGGCTTCTCCTTGCTTCTTCCTCCTCCTCCTCCTGCTGATCAACCTGTAGTAGATCACACACCAGAACCAGCAATATTATCAAACGAAGAAGCCACTGTGCAACAACAATTGCCTCAGCTACAAATCCCAGTTCTTTCTTCTGCAGAATCTGCTCCTTTGGTTCCTAATCATCACCCAGGATCATCATCTTCATCTTCATCTCCATCTCCCCTTAGACCTCCCGTTCTTTCGATTCCAGCAGCAACAGCAGGAATTCCAGCCCCAAGGGCCCCACCTACTTTTGCTGTTGCTCCTCCTCCGCAATGGAGGCCAAATCTCAACCTCAATCCCATGGCCAATCAACTTATGTTTCAGGCTTTTCAGCGTACTCAAATGATGAACCACGTGGGCATGCAGGCTCCACGAGGAGGAGTAGCCATGGCTGCTCAGAGACCTCCTGCAAATACTAATGTTTCCCCCACCAACCTCTTCATCGGCGGTTTTTTGCCGGTTCAAAATGCATATGGTGGTGCTCGACCCAACAACCCTGCCGTCCTAAACCGGAGTCACTGTCAGTTCCGCAGAAGTCACAATCGTTACGTACGTTCATGTAGATTGATCCCTCCGCATCCACCTCCATCCAAGTCACGTGATTTTACCAATAATGGATCCAAACAAAACAACCTTAAAGATTAA 1659 0.4653 MGSSGANGSFEMACTVPHRIEDAEADRLHRSLTDPTAIRKEPVDDWVSFEVDTDGFFHFTLIPSNSENADRPRVKRGRKRKNPSLNQSNNSSSSSNSEAPPRAIGLDGSVPEGDWFCHNCSGEVDNLSDSTVNPKRRRRGYLKRACKVPSGCCLCSTIPKKLIPDENAFFSFKTKSNHQSNLSARNDDDGVGGTHIQHNNNNGDKRSVLRGGQHGKRTSKGPTVASQQRQPAGLAVVLHGENLNQEEVAAGRAAAEEAPRNKARETPWTEDEVDALWVGVRRHGPDNWDTILNDKKLRVFQLCKKTSHDLSMRWQKELEIMYSIVKTSGFSLLLPPPPPADQPVVDHTPEPAILSNEEATVQQQLPQLQIPVLSSAESAPLVPNHHPGSSSSSSSPSPLRPPVLSIPAATAGIPAPRAPPTFAVAPPPQWRPNLNLNPMANQLMFQAFQRTQMMNHVGMQAPRGGVAMAAQRPPANTNVSPTNLFIGGFLPVQNAYGGARPNNPAVLNRSHCQFRRSHNRYVRSCRLIPPHPPPSKSRDFTNNGSKQNNLKD 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0436 552 ProSiteProfiles Myb-like domain profile. 260 318 IPR001005 -
Lele11g0436 552 MobiDBLite consensus disorder prediction 176 230 - -
Lele11g0436 552 MobiDBLite consensus disorder prediction 384 399 - -
Lele11g0436 552 MobiDBLite consensus disorder prediction 83 100 - -
Lele11g0436 552 MobiDBLite consensus disorder prediction 67 105 - -
Lele11g0436 552 MobiDBLite consensus disorder prediction 537 552 - -
Lele11g0436 552 Gene3D - 265 317 - -
Lele11g0436 552 MobiDBLite consensus disorder prediction 525 552 - -
Lele11g0436 552 MobiDBLite consensus disorder prediction 378 412 - -
Lele11g0436 552 SUPERFAMILY Homeodomain-like 265 319 IPR009057 -
Lele11g0436 552 CDD SANT_TRF 267 314 - -
Lele11g0436 552 MobiDBLite consensus disorder prediction 176 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0436 Lele-ChrLele11 4327987 4334613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0436 268 315 Single Myb Histone (SMH) Gene Family AT1G17520 43.750 5.98e-06 46.6