Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0431 ATGGAATATTCTGTGGTGAAAAATCAAAGTTTTAATTTCAAGTCTCATATATCAGCACAGTTAATTGCAGTAACTGAAAGAAGCAGAGGTTACTTGAAAATGAGAAGTGGTTTTCTTCTCCTCTATCTGACTCTAGCGATTATTTCTCTCACTCATTGTGATGCAGAGAGATCGATGAGAGTAACATCAAAAGGTGAAAAGCATGGGAGAAGTCTGACACACAAGCACACGAAGAAGTTGAGAATAGTGGCTTTGAAGCATTTTGATTTTTCTTCTTTAGAATTTTCAAATGCTGCCCAGAGTGTTGACTCATCATCTCCTTTGCCACCTTATGAATCTATAACTCCTGTTCCTTTACCACAAAATACCCCACCGTTTTGTTGTCCTCCTCCACCTCCGACGACGGGCCTTCAATTACCACCACCAGGCCCAACTGGATCTCTTCCCAACCCTACCCCGCAAAGTATCCCAAACTCGCCTGACATGGGTTCCCCCTTGCAAAATACTCCAATTATTATCCCAGGCCCACCGGGTAACATTCCGGGCTCACCTGAGTCTATAACAAGCCCACCAAGTACTACTATCCCATCCCCAAGTGGAGGCACTGGCCTGGCCTCACCTGAACCGACACAAAATCCTCCAATCATTCTCCCAAGCCCGCCTGGATCTACAACAAGCCCACCAAGTACTATCCCATCCCCGAGTGGAGGTACTGGGCCAGGGTCACCTGAACCGATACAAAATCCACCTGGGTCTACAACGAACCCGCCAAGTACAATTTTGCCTCCTAGTGAAGGTTCCGTTCCTGGCTCACCGGAACCAATACAAAATCCTCCCATTGTTCTTCCAGGCCCACCTGGATCAACCACAAACCCACCAAGTACAAACCCATCTCCCGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGAGGGGGAGGCGGTGGCAATGTTCCTAGCCCAACAGTGTTTGAGCCTCCTGTAGTGTATCCACCACCTTCAGTGCCTCCTCCTCCAAGCCGCATGGCTCCAACTGGAGCCTTATGGTGTGTGGCTAAGCCTTCAGTGCCAGACCCAATAATGCAAGAAGCCATGGACTATGCTTGTGGATTAGGAGCAGATTGTGATCCCATTCAGCCCAATAGGCCTTGCTTTGAGCCTGATACTGTTATTGCACACACTTCATTTGCTTTCAATAGTTTCTGGCAAAATTCCAAGGCCAGTGGTGGGACCTGTGACTTTGGAGGGACTGGCATGCTTGTTTCAGAGGACCCAAGCTACAATGGATGCCACTTTGTCTACAGTTAG 1305 0.4858 MEYSVVKNQSFNFKSHISAQLIAVTERSRGYLKMRSGFLLLYLTLAIISLTHCDAERSMRVTSKGEKHGRSLTHKHTKKLRIVALKHFDFSSLEFSNAAQSVDSSSPLPPYESITPVPLPQNTPPFCCPPPPPTTGLQLPPPGPTGSLPNPTPQSIPNSPDMGSPLQNTPIIIPGPPGNIPGSPESITSPPSTTIPSPSGGTGLASPEPTQNPPIILPSPPGSTTSPPSTIPSPSGGTGPGSPEPIQNPPGSTTNPPSTILPPSEGSVPGSPEPIQNPPIVLPGPPGSTTNPPSTNPSPGGGGGGGGGGGGGGGGNVPSPTVFEPPVVYPPPSVPPPPSRMAPTGALWCVAKPSVPDPIMQEAMDYACGLGADCDPIQPNRPCFEPDTVIAHTSFAFNSFWQNSKASGGTCDFGGTGMLVSEDPSYNGCHFVYS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0431 434 MobiDBLite consensus disorder prediction 101 339 - -
Lele11g0431 434 PANTHER BETA-1,3 GLUCANASE 343 431 IPR044788 -
Lele11g0431 434 MobiDBLite consensus disorder prediction 111 158 - -
Lele11g0431 434 MobiDBLite consensus disorder prediction 185 209 - -
Lele11g0431 434 Pfam X8 domain 347 418 IPR012946 -
Lele11g0431 434 MobiDBLite consensus disorder prediction 267 293 - -
Lele11g0431 434 MobiDBLite consensus disorder prediction 323 339 - -
Lele11g0431 434 MobiDBLite consensus disorder prediction 243 257 - -
Lele11g0431 434 FunFam Glucan endo-1,3-beta-glucosidase 4 342 434 - -
Lele11g0431 434 SMART X8_cls 347 431 IPR012946 -
Lele11g0431 434 MobiDBLite consensus disorder prediction 170 184 - -
Lele11g0431 434 Gene3D - 341 433 - -
Lele11g0431 434 MobiDBLite consensus disorder prediction 211 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0431 Lele-ChrLele11 4295585 4299203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0431 348 432 Glycoside Hydrolase AT5G56590 45.349 1.99e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0431 11 4295585 4299203 Lele11g0431 11 4295585 4299203 ECH
Lele09g0445 09 3302801 3305764 Lele11g0431 11 4295585 4299203 hybridization
Lele10g0410 10 2884337 2886496 Lele11g0431 11 4295585 4299203 hybridization