Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0424 ATGTCTCTTTCACGCTCCCCCTTTCAGGCTTCTCTTGCTACTTCAGCAACTTTGGTTGCACCCACAAATGTAGAGAACAGAGTTCAGAGTAGACCTAATATTATGTTTGAGGAGAATAAAGAGAGAATAAAAAGAATGCTCAATAAAGTTGAGCTTTCTGTATCAAGTTATGACACAGCTTGGGTGGCAATGATTCCATCACCTTCTTCTCCACAAGCTCCTCTGTTCCCTCGAACCCTAAATTGGTTATTGGAAAATCAACACATTGATGGATCATGGGGTCTTCCTAATCGTGATGAGTCGTTGACCAAAGACTCTCTTCTATCAACATTGGCCTGTGTCCTTGCTCTTAAGCAATGGGGTATTGGTGAACACCAAACTAATAGAGGACTTGAATATATCGAGTCAAACATTGCTTCAGCTCTTGATGATGATAAGCAACATTCTCCCATTGGATTTGACATTATCTTCCCTCATTTGCTCGAGCAAGCCCAAAACTTGGATCTCAATCTTCCTCTTGGAGGAAGACGTTTAGAGACATTCATCCAAAATAGAGAATCAGAACTCAAAAGAGGATGTGGTGGAAGCAACTTAGAGGGATGGAAAGCATATTTGGCATATATTTCAGAAGGATTTGGAAAGTCTCAAGATTGGGAAATGGCCATGAAACATCAAAGAAAGAATGGATCTTTATTTAACTCACCTGCCACTACTGCATCTGCATTTATACAACTAAGCAATGCAAAGTGTTTTGATTATCTAAGTTCATTATTAGATACATTTGGGGAAGCCGTTCCAACGTGGCATCCTTTCGATGTCTTTGCTCGAATCTATATGGTTGATAGTCTTGAAAAATTGGGCATTGACCGTTTTTTCAGAGAGGAAATCGATAGTGTGTTAAACCAAACATACAGATGGTGGCAGAAGGAGGAGGATGATATATTTTTGGAACCAACCACATGTGCCATTGCGTTTCGTTTACTACGTTTACATGAATACGATGTTTCTTCAGATGCACTGAGTCGATTTTCAAAGGAGAAATTCTGCAATACCCTTCAAGGACATTTAAAGGATGTGAATGCTGTTATGGAGTTACAAAAGGCTTCACAAATACCTATACATTCAAATGATCCAGTTTTGGAAGAACTAAACTCGTGGACAAGAGACTTCCTTAAAGAATATTTGTCTTGTTGCTCACAACAGGATCTCAAACCACTTCATAACATTGATCATGAGGTTCGTTTTTCTTTGCGATTTCCTCATCAAGCTTATTTGGATCGCATGTTCACCCGAAAAATAATGGAGAACTATAAGGCTGACCAAAAGAGAATTCTGAAAACATCATACAGTTCCGTGAACCTTGGAAACAGAGAATTCATTGAGTTAGCAGTGGAAGACTTCAATAGCTGCCAACTTGTAATTCGCGAAGAATTAGAAGAATACAACAGGTGGTTCATGGAGAGTGGAATGGACAAGCTAGAGTTTCCGAGACCAAAAGTGGCCTATTCCTATTTGACAGCAGGAGCAACACTCGTGGCACCTGAGCTTCGTGAGGCTCGAATGTCATGGGCAAAGAATTGCTTGCTCATATGCGTTTCTGATGACATGTACGATGTTTGGGGTAGTGAAGAAGACCAGATAAGGCTTGTCCAACTAATGGAGAGGTGGGACGTGGATATCGAGAAAGAAAATTGTTCAGAGCCAGTTAAAATATTATTCTTAGCACTAAAAGGGACCATTTGTGAGATGGCAGACCAAGCCGTTAAAATTCAAGGACGAAGCGTGTTGAACCACCTCATTCAACTTTGGGTGGAGTGTCTGCAATGTTTTCTACAGGAAGCCGAATGGCGGAGAAACAATTATGTGCCAACTTATGAAGAATATGTGCCTGTGTCACTGACATCATTTTCCATGGGACCAATTGTCCTGTCAGCTCTCTATCTTGTTGGACCTAAGCTTCCGCAGGAAAGTATTGAAAGTGATGAATACAATCGTCTCTTTTACCTTGTTAGCATTTATGGACGATTACTCAACGATATCAACGGCTACAAGAGAGAAATAGCGGAAGGGAAACTGAACGCAGTAGCTGTGAGAATGAGGAATGGATCAGGAAGTAAAGAAGAGGTGGTGAAGAAGATACAAGAAGAGATAGAAGAAACCGGGAGAGAGCTGTTGAGAATGGTTTTGGAGAAAGAAGGAAGCATAATACCAAGGGAAGTGAAGGATGTAGTATGGAAAATGGCGAGATCGGCGTATGCGGTATACAAGAAAAAAGATGATGTGATCCATGCACGTGACTCGTCGGACGAGGTCATTAGTATCATAGATGCAGTCGTCAGCGATCCCATGGTTCTAAGCATATGA 2364 0.4099 MSLSRSPFQASLATSATLVAPTNVENRVQSRPNIMFEENKERIKRMLNKVELSVSSYDTAWVAMIPSPSSPQAPLFPRTLNWLLENQHIDGSWGLPNRDESLTKDSLLSTLACVLALKQWGIGEHQTNRGLEYIESNIASALDDDKQHSPIGFDIIFPHLLEQAQNLDLNLPLGGRRLETFIQNRESELKRGCGGSNLEGWKAYLAYISEGFGKSQDWEMAMKHQRKNGSLFNSPATTASAFIQLSNAKCFDYLSSLLDTFGEAVPTWHPFDVFARIYMVDSLEKLGIDRFFREEIDSVLNQTYRWWQKEEDDIFLEPTTCAIAFRLLRLHEYDVSSDALSRFSKEKFCNTLQGHLKDVNAVMELQKASQIPIHSNDPVLEELNSWTRDFLKEYLSCCSQQDLKPLHNIDHEVRFSLRFPHQAYLDRMFTRKIMENYKADQKRILKTSYSSVNLGNREFIELAVEDFNSCQLVIREELEEYNRWFMESGMDKLEFPRPKVAYSYLTAGATLVAPELREARMSWAKNCLLICVSDDMYDVWGSEEDQIRLVQLMERWDVDIEKENCSEPVKILFLALKGTICEMADQAVKIQGRSVLNHLIQLWVECLQCFLQEAEWRRNNYVPTYEEYVPVSLTSFSMGPIVLSALYLVGPKLPQESIESDEYNRLFYLVSIYGRLLNDINGYKREIAEGKLNAVAVRMRNGSGSKEEVVKKIQEEIEETGRELLRMVLEKEGSIIPREVKDVVWKMARSAYAVYKKKDDVIHARDSSDEVISIIDAVVSDPMVLSI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0424 787 Coils Coil 710 730 - -
Lele11g0424 787 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 227 440 IPR008930 -
Lele11g0424 787 Pfam Terpene synthase family, metal binding domain 461 721 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lele11g0424 787 SFLD Terpene Cyclase Like 1 N-term 29 450 - -
Lele11g0424 787 Gene3D - 45 467 IPR036965 GO:0010333|GO:0016829
Lele11g0424 787 SUPERFAMILY Terpenoid synthases 458 760 IPR008949 -
Lele11g0424 787 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 56 248 IPR008930 -
Lele11g0424 787 Gene3D - 53 258 - -
Lele11g0424 787 FunFam Ent-copalyl diphosphate synthase, chloroplastic 250 467 - -
Lele11g0424 787 FunFam Ent-kaur-16-ene synthase, chloroplastic 470 785 - -
Lele11g0424 787 Pfam Terpene synthase, N-terminal domain 217 416 IPR001906 GO:0010333|GO:0016829
Lele11g0424 787 Gene3D Farnesyl Diphosphate Synthase 470 786 IPR008949 -
Lele11g0424 787 FunFam cis-abienol synthase, chloroplastic 53 258 - -
Lele11g0424 787 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 36 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0424 Lele-ChrLele11 4169311 4173428 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0424 11 4169311 4173428 Lele11g0424 11 4169311 4173428 ECH
Lele09g0444 09 3291932 3296210 Lele11g0424 11 4169311 4173428 hybridization