Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0414 ATGTTCCCTCCAAAGAAGCCCTCCTCTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGCGACTCTGGCCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGTTGGACCGTCGAACTCCATGAACGCTTCGTCGACGCCGTTACTCAGCTCGGCGGCCCCGATAAGGCCACGCCTAAAACCATCATGAGGGTTATGGGTGTCAAGGGTCTTACCCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAACCCCACAAGGAATTCAATGATCACTCGATTAAGGATAGTATGAGAGCTTCGGCTTTAGAGCTTCAACGAAACACTGCTTCCCCATCGGCCATGATTGGTCGCAACATGAATGATAACTCACAAATGGTTGATGCGATCAGGATGCAAATGGAGGTGCAGAGAAGACTGCATGAACAGCTTGAGGTCCAGAAACATCTTCAGCTAAGAATTGAAGCTCAAGGAAAGTACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGTTGCCACTAATAACTTAAAGGGAAATATCAATATCGGAGCAGCTCAAGCCATCCCTGAAATAGGAGGAGGAGTCATGAAAGATTTTAGTTCTCCTCTGAGTTTTCCTTTTCAAGAACTCAACATCTATGGTGGTGGTAGTGGCGGCAGTGACCAACTTGATCATCATCTTCACCATATGGAGAGGCCACAGCTCGAAGGGTTGATGATACCGAGTAACAGCAATAACAATAACAATAATGAAAATTTGTGTCTGGGCAAGAAGAGGTCAAATCCTTATAATAGTACTACTACCGGGAAGAGTCCTTTGATTTGGAACGATGATCTTCGGCTTCATCAAGATTTAGGGACGGCTTCTTCATGCCTTGGAGGACCTCAAGATGATCCTTTCAAAGGTCTTGATCAGGCGCAACTTCACATTGCTCCGCCGTCATTGGATCATAGATCAGGTGAAATGGACCCCATGTCAGAGATTTATGACACGAAGCAAGTGGTACAAGGAGAAGCTGTGTGTGACAAGTTTTCAGACGCCTCAGTGAAGCTTGAAAGGCCGTCGCCAAGAAGGACGCCGACTACCGCTCCTGTTCATGGAGAAAGGATAAGCCCCATGATTAATAGTGGTACTATGGCACAAGGAAGAAGCTCACCATTTGGGTGA 1203 0.4705 MFPPKKPSSMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDSMRASALELQRNTASPSAMIGRNMNDNSQMVDAIRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMVATNNLKGNINIGAAQAIPEIGGGVMKDFSSPLSFPFQELNIYGGGSGGSDQLDHHLHHMERPQLEGLMIPSNSNNNNNNENLCLGKKRSNPYNSTTTGKSPLIWNDDLRLHQDLGTASSCLGGPQDDPFKGLDQAQLHIAPPSLDHRSGEMDPMSEIYDTKQVVQGEAVCDKFSDASVKLERPSPRRTPTTAPVHGERISPMINSGTMAQGRSSPFG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0414 400 MobiDBLite consensus disorder prediction 1 24 - -
Lele11g0414 400 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Lele11g0414 400 MobiDBLite consensus disorder prediction 386 400 - -
Lele11g0414 400 FunFam Myb family transcription factor 31 89 - -
Lele11g0414 400 Pfam MYB-CC type transfactor, LHEQLE motif 130 176 IPR025756 -
Lele11g0414 400 Gene3D - 31 89 - -
Lele11g0414 400 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Lele11g0414 400 MobiDBLite consensus disorder prediction 363 400 - -
Lele11g0414 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Lele11g0414 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 189 IPR044848 GO:0003700
Lele11g0414 400 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0414 Lele-ChrLele11 3959835 3962383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0414 1 400 G2-like Transcription Factor Family AT1G79430 53.771 5.34e-124 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele11g0414 Myb_DNA-binding 2.3e-06 CL0123