Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0409 ATGGGGCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGACTGTGGTCTCCTGAAGAAGATGACAAGCTCGTCAAATTCATTACCACTAATGGCCACAAAAGTTGGAGTTCTGTTCCTAAACTTGCAGGGTTGCAGAGATGTGGGAAAAGTTGCAGATTGAGATGGATAAACTATTTGAGACCTGACCTCAAGAGAGGTTCCTTCACTGCCGATGAAGAACAAACCATTATTGACGTTCATCGCATTCTCGGGAATAGATGGGCTCAGATAGCGAAGCATCTACCGGGAAGAACAGACAACGAGGTGAAGAATTTCTGGAACTCATGCATAAAGAAGAAACTCATTTCTCAGGGCTTTGACCCTCAAACTCACAATCTTCTCTCTTCTCATCGACCACCTTCTCTTACTCTTTCTTCCAAATCTGAATCCACTTTCAGACTCGTCCATGAACCTCATCATCGTAGTATGAATCTTCAACCACCTTGTACCTCCGTCCCAGTCTTCTCCATCGAATACCAGCAGCAACCTAATTATAATGTCTCTAACAGTAGTAGTAATAATAATAATAGTAATGTCCATGAACCTCATAATTTTCCCTTTGAATCATCCATTATTATTGATGTTGGAAATAATAATAATATTCCTGCGCCCAAGAACAATAATGATTGCTTATCTTCACTTGTCGGGTTTTCTGAGAATATTGACAACAGATCATCATCATCTTCAGTGTGGGTTTCTCGGGATGATCATATTGCTGAAACTCATCAGATCTTTAGATCATCAGCTCAGACGTTAATGGAGGAAGGAGAAATTACTACTGAAGCACAGTTAGAACAAGACAAGGACAAGGGCAAGAGGAGTACTACTACTGATAATAATATTGAGCAAATCAGAGAAGAAGACAATATTAATTATAATATTAATAGTAATAACAATAACTTTGATTTTGGGTTGTTGGAAGGTGTACTTAACTCTGAATATATGTCTTATGACGTTCTCTCCTCCATGGATGATGATGACCTTGCGTGGAACTTTTAG 1041 0.3929 MGHRCCSKQKIKRGLWSPEEDDKLVKFITTNGHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTADEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSSHRPPSLTLSSKSESTFRLVHEPHHRSMNLQPPCTSVPVFSIEYQQQPNYNVSNSSSNNNNSNVHEPHNFPFESSIIIDVGNNNNIPAPKNNNDCLSSLVGFSENIDNRSSSSSVWVSRDDHIAETHQIFRSSAQTLMEEGEITTEAQLEQDKDKGKRSTTTDNNIEQIREEDNINYNINSNNNNFDFGLLEGVLNSEYMSYDVLSSMDDDDLAWNF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0409 346 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Lele11g0409 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Lele11g0409 346 FunFam MYB transcription factor 10 66 - -
Lele11g0409 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Lele11g0409 346 FunFam Transcription factor MYB86 67 142 - -
Lele11g0409 346 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Lele11g0409 346 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lele11g0409 346 Gene3D - 68 115 - -
Lele11g0409 346 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lele11g0409 346 CDD SANT 16 60 IPR001005 -
Lele11g0409 346 SMART sant 12 62 IPR001005 -
Lele11g0409 346 SMART sant 65 113 IPR001005 -
Lele11g0409 346 Gene3D - 10 66 - -
Lele11g0409 346 CDD SANT 68 108 IPR001005 -
Lele11g0409 346 PANTHER MYB DOMAIN PROTEIN 55 1 298 - -
Lele11g0409 346 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0409 Lele-ChrLele11 3915565 3917584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0409 1 132 MYB Transcription Factor Family AT3G12720 84.091 2.17e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele11g0409 Myb_DNA-binding 4.8e-13 CL0123