Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0408 ATGGCACCGATGAGTCTCCCACCTGGGTTTCGGTTCCACCCAACAGATGAAGAACTCGTTGCTTACTACTTGGAAAGAAAAATCACAGGTCGTTCTATAGAGCTTGAAATTGTCCCTGAAGTTGATCTTTACAAATGCGAACCATGGGATTTGCCAGATAAGTCGTTCTTGCCAAGTAAGGATTTGGAGTGGTACTTCTACAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAACCGAGCAACAAGAGCTGGATACTGGAAAGCCACAGGAAAAGATAGAGCCGTTCATTCTCTGAAACGCCAAGTAGGGATGAAGAAGACGTTGGTTTATTACAGAGGAAGGGCTCCACATGGCATTAGAACCAACTGGGTCATGCATGAGTATCGCCTCACTGATTCACTCCCTCCTCCTTCTTCTTCCTCCTGCTCCTTGAAGGATTCTTATTCATTGTGTCGTGTCTTCAAGAAGACGATCCAAATCCCAAAACCAAAAGAAGATCAGGAGGAAGAGGAAACAGAAATGACTGCTAAGAAAAATAATAAGGGATCGAAGTCTGAGATGTGGGTCGCATCAGAAGAACAAGGATTAAGGGAGGATTCAAGTGGCTTCGAGGTTTCTAAAGAAATGGAAATTGCAGATGAGAAAATTAATATCTTCAATAATAATAATAATAATCCTGACGGTGGTGACAATTCTCATAGCAAGTTTCCAGCTTGTGATAATGCTTCATCTTCAGATCTCACTCAAGGGACCCCCACTGATAATGATTTTCAAACCCAAATTGCTTCTGATGAAGCAAATAGTGCAGCTAATCCGTTTTCCCTTGGAATTGACTATTCATCAAATCTATTTCAGGAAATGGAGCTACAACTGTATGCTGGCATGCAGTATCAACTTCCATATCCACCATTGGAGCTTGAAGATTTTCCTCAAACAAGTTTCGTAGAGACGAAGCCATTAATGAAGCCAGCAGCAGAACAAACGATGATGATGAATGAATGCAACAACATGGTGTATGATCACAAGTACAAGAGCAGTAATACAATGAGTGGGACCCTAGAAGAGATCATCTCCTTGTGTTCATCTCATCATCATCAAGATAATAACTCTTTGCCTCTCTCCATTCTAGATTGA 1143 0.4147 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELEIVPEVDLYKCEPWDLPDKSFLPSKDLEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSLKRQVGMKKTLVYYRGRAPHGIRTNWVMHEYRLTDSLPPPSSSSCSLKDSYSLCRVFKKTIQIPKPKEDQEEEETEMTAKKNNKGSKSEMWVASEEQGLREDSSGFEVSKEMEIADEKINIFNNNNNNPDGGDNSHSKFPACDNASSSDLTQGTPTDNDFQTQIASDEANSAANPFSLGIDYSSNLFQEMELQLYAGMQYQLPYPPLELEDFPQTSFVETKPLMKPAAEQTMMMNECNNMVYDHKYKSSNTMSGTLEEIISLCSSHHHQDNNSLPLSILD 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0408 380 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lele11g0408 380 MobiDBLite consensus disorder prediction 165 189 - -
Lele11g0408 380 FunFam Nac domain-containing protein 86 15 162 - -
Lele11g0408 380 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Lele11g0408 380 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Lele11g0408 380 MobiDBLite consensus disorder prediction 221 260 - -
Lele11g0408 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 233 - -
Lele11g0408 380 MobiDBLite consensus disorder prediction 165 183 - -
Lele11g0408 380 Gene3D NAC domain 15 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0408 Lele-ChrLele11 3909564 3913163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0408 1 361 NAC Transcription Factor Family AT1G54330 51.657 1.54e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0408 NAM 6.4e-39 No_clan