Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0380 ATGAAGGCCGTGGTCTATGCTCTTTCACCTATCCAGCAGAAGTTTATGACTGGTCTCTGGAAGGATTTGCCTTCCAAGATTCACCACAAGATCTCTGAAAATTGGATCAGTGCCACACTCTTGGTCGGTCCACTTGTCGATGGTGGTGATGGTGTCTCCTCTGGTTCTGCTACTGGTACTTCACTTGATGTCCAACTATGGAGGAGGATATTGGGGAAGAGGGGTATTTTCTTCTTTGATTCCTTTGCCGGAGAAAGAGTCGTTTCACAGAGCCGGAGGGACGCCGTGGGGAGTTGGGTTGCTTCTTGTGGTTGTCTTGTTCATGGCGTCTCATCGTTCTTCTTTCCTAGAACGATGGTTCCCTTTACTTTCCAGATAACAAGAAAAAGTGACGTGTTGATTCTTCGTATTAAGTTCGGGAGTCACAGACAAAATCTCAGTTCAGTAGCTACTTCCATTTCCAGCCAAGAAGACGAACACTGGAATACAGATACAGAGAAGAAAAACATAGCAAAAATGGAGATATTGTCACAATTGTGGTCCTTGTTAGGCTTACTCACTGTACTCCAAAATGTCTTGCCGTCGCAGCTTCTCTCTCTCCTCCATTCCTCCTACGAGACTCTTACGGATTTTCTCTCTCCTTACTCTTACTTCGAAATACCCGAATTCAATGGCTACTGCGGCGTCGACATCAACGATTTGTACCGCCATGTTCATCTCTACCTCAACTCCGTCAACCACTCCGCCGCATCCGCTTGCCGCCGCCTCACCCTTTCTCGGTCCAAGTCCTCCAATCGCATTTCCTACACCGTCGCCCCTAATCAGACCGTTCACGACACCTTTGACGGGCACCGCCTCTCGTGGACTCACCACGTCGAGACGGTGCAGGACTCGTTGGAGGAGAAGCGGAGCTTCACTCTCCGGCTGCCGAAGCGCCAACGTCAGACCCTCCTCTCTGCCTACCTCAGTCACGTGACCTCACGTGCGGAGGAGTTCGAGCGGGTCTCGAGAGAGAGGAGGCTCTTCACCAACAATGGAAACGGGTCATTTGAATCCGGGTGGGTCTCCGTTCCATTCCGGCATCCTTCCACGTTTGACACGCTCGCTCTGGAGCCTGAGTTGAAAAGGCAGATAAAAAACGACCTCACTGCGTTTGCTAAAGGCAGAGAGTTCTATCATAGAGTGGGTCGGGCATGGAAGCGCGGGTACTTACTATACGGACCACCCGGATCCGGAAAATCGAGTTTGATCGCAGCTATGGCGAACTTCCTCTGCTACGACGTGTACGATCTGGAGCTCACCAAGGTGTCTGATAATTCCGAGCTGAGGTCATTACTGATACAAACGACGAACCGTTCCATCATCGTGATAGAAGACATTGATTGCTCCGTCGACTTGACGGCGGACAGGATGACGAAGAAACCGACAATGGCGAAGTCCAAAACAATGAGAGCAAAAACGGCGTCTTCGTCGGACTGCTCCAAGGAAGAAAGCGGACGGGTTACTCTATCGGGGCTCCTCAATTTCACGGATGGGCTGTGGTCGTGTTGCGGAGAAGAGAGGATCATCGTCTTCACCACGAATCATAGAGACAATGTGGACCCAGCTCTGGTACGGTGCGGGCGAATGGATGTGCATGTCAATCTTGGCGCGTGCGGCATGCATGCGTTCAGGGACCTGGTAAGGAATTACCTGGGGTTGGAATCGCACGCGCTGTTCGATGCGGTGGAGGGCTGCATAAGGTCCGGTGGGTCGCTTACTCCGGCTCAGATCGGCGAAATGCTGTTGAGGAATAGAGGAGACGCTGATGTGGCCATGAGGGAGGTGGTGTCGGCGATGCAAACGAGGATGCTTACGGTGGCCGCCGCAGGTGGTGGGGGAGGTGGACAATGGGAGCAGACGGATAATGAAGACACAGTGGGGGGAAGGTCACCGGAAAGCGTGCTGATGACGGGGTCGCCGGAGAATTGGGACTCGTGGAGCGGGAAGAAGAGGAGGGAGAGTGGGCCCCACTGCGATAAGAAACAGAAGTTTTTGGTGAGGTTGAAGTCGTTGACCAAGTCAGAGTATGGTAGAAGAGTGTTGACCCCAGAAAAATCAAGAGTTAAGATAACAGGAATGCATTTCGGGATCGACGTGGCCACACCGCCGGAGGAGCTCACCCAGCTATACAACTCCATCATCGAGAAGTTCGACGTCGACGGCAGCGGCACCGTGGACAAGGGCTAG 2229 0.5258 MKAVVYALSPIQQKFMTGLWKDLPSKIHHKISENWISATLLVGPLVDGGDGVSSGSATGTSLDVQLWRRILGKRGIFFFDSFAGERVVSQSRRDAVGSWVASCGCLVHGVSSFFFPRTMVPFTFQITRKSDVLILRIKFGSHRQNLSSVATSISSQEDEHWNTDTEKKNIAKMEILSQLWSLLGLLTVLQNVLPSQLLSLLHSSYETLTDFLSPYSYFEIPEFNGYCGVDINDLYRHVHLYLNSVNHSAASACRRLTLSRSKSSNRISYTVAPNQTVHDTFDGHRLSWTHHVETVQDSLEEKRSFTLRLPKRQRQTLLSAYLSHVTSRAEEFERVSRERRLFTNNGNGSFESGWVSVPFRHPSTFDTLALEPELKRQIKNDLTAFAKGREFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANFLCYDVYDLELTKVSDNSELRSLLIQTTNRSIIVIEDIDCSVDLTADRMTKKPTMAKSKTMRAKTASSSDCSKEESGRVTLSGLLNFTDGLWSCCGEERIIVFTTNHRDNVDPALVRCGRMDVHVNLGACGMHAFRDLVRNYLGLESHALFDAVEGCIRSGGSLTPAQIGEMLLRNRGDADVAMREVVSAMQTRMLTVAAAGGGGGGQWEQTDNEDTVGGRSPESVLMTGSPENWDSWSGKKRRESGPHCDKKQKFLVRLKSLTKSEYGRRVLTPEKSRVKITGMHFGIDVATPPEELTQLYNSIIEKFDVDGSGTVDKG 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0380 742 CDD AAA 400 461 - -
Lele11g0380 742 Gene3D - 360 547 IPR027417 -
Lele11g0380 742 PANTHER BCS1 AAA-TYPE ATPASE 179 614 - -
Lele11g0380 742 MobiDBLite consensus disorder prediction 623 672 - -
Lele11g0380 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 595 IPR027417 -
Lele11g0380 742 Pfam Domain associated at C-terminal with AAA 193 291 IPR025753 -
Lele11g0380 742 Gene3D - 548 622 - -
Lele11g0380 742 ProSitePatterns AAA-protein family signature. 521 539 IPR003960 GO:0005524|GO:0016887
Lele11g0380 742 Pfam Cytochrome b-c1 complex subunit 8 1 46 IPR020101 GO:0005750|GO:0070469
Lele11g0380 742 ProSiteProfiles EF-hand calcium-binding domain profile. 719 742 IPR002048 GO:0005509
Lele11g0380 742 Pfam ATPase family associated with various cellular activities (AAA) 404 549 IPR003959 GO:0005524|GO:0016887
Lele11g0380 742 SMART AAA_5 399 549 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0380 Lele-ChrLele11 3684890 3693729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0380 1 46 Chloroplast and Mitochondria Gene Families AT3G10860 84.783 1.67e-22 90.1