Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0373 ATGGAGCTTGGTTTGAGCTTGGGAGATCACGCTTCAAAGCCTTCTGAAGCTTCCAGCCTTCGGGGATTAGGCTTCAGTACCACTTTATCCATTGGTTCTTTCCGTACCAAAGCATCAAATCAACAAGAAGAAGAAGAAGAAGAACCAGCAGAAAGAGAAGCAAAAAAGCAAAAGGGTAAACAGAGTATTGAAGACCACGAAGATAGAGTTGAATATGTTCAGCTTGATCTTCTTCCTCACACTCCGGTCGCTGTTTCTCGCACTAACCCACCTTCGCAAATCTCATTTCCATGGCCTTCTCCTGAAAATGGAAGTTCTTCTAGGGGCATGGATATGAATAGATTGCCGCCGCCTCTGCTGCCAGGGGCGGAGGAAGATGAGGCGGCGATGTCGTCATCTCCGAACAGCACTGCATCGTCGTTTCAGATGGATCTCAGTGTCTTTAAGACAGGAGGGAGTAGTATTAGTGGTTGTAAGAGGGATTATGAGGGAGAGTTATATTATGATCAAAGGGCTGCTTCTTCAAGAGCAAGCGATGAAGATGACAACGTTGGTAGTACGAGGAAGAAGCTAAGGCTGTCCAAGGAACAATCTGCTTTTCTCGAAGAGAGCTTCAAAGAACACAGCACCCTTAACCCAAAACAGAAACTTGCTCTTGCAAAACAGCTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAGGTAGATTGTGAGTACTTGAAGAGGTGTTGTGAGACATTAACTGAAGAGAACAGAAGGCTTCACAAAGAGCTTCAAGAACTGAGAGCTTTGAAGGCCAATTCAAACCCATTCTTCATGCAATTACCAGCCACCACCTTGACCATGTGTCCCTCTTGTGAGCGAGTCGCCACCAACAATTCCTCCACTACCACCACCATCGCCGCCGCCACAACGGTTGCTACTTCCTCTGCTAGTCCATCTGCGACCAAAGTCACTGAAACAAGAACCGCCACTGAACCGGCCTCATTCAAAGGCATGGGATTCCCTCTAAGCAAACCAAAGTTCTATCCTTTTGCTCACACCAAAACCCACCATAACCATCCCAACCCATCTACACCGTCTTGA 1125 0.4711 MELGLSLGDHASKPSEASSLRGLGFSTTLSIGSFRTKASNQQEEEEEEPAEREAKKQKGKQSIEDHEDRVEYVQLDLLPHTPVAVSRTNPPSQISFPWPSPENGSSSRGMDMNRLPPPLLPGAEEDEAAMSSSPNSTASSFQMDLSVFKTGGSSISGCKRDYEGELYYDQRAASSRASDEDDNVGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKANSNPFFMQLPATTLTMCPSCERVATNNSSTTTTIAAATTVATSSASPSATKVTETRTATEPASFKGMGFPLSKPKFYPFAHTKTHHNHPNPSTPS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0373 374 Pfam HD-ZIP protein N terminus 95 141 IPR006712 GO:0005634
Lele11g0373 374 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 28 327 - -
Lele11g0373 374 Pfam Homeodomain 188 242 IPR001356 GO:0003677
Lele11g0373 374 MobiDBLite consensus disorder prediction 324 344 - -
Lele11g0373 374 ProSitePatterns 'Homeobox' domain signature. 219 242 IPR017970 GO:0000981|GO:0006355
Lele11g0373 374 MobiDBLite consensus disorder prediction 324 339 - -
Lele11g0373 374 ProSiteProfiles 'Homeobox' domain profile. 184 244 IPR001356 GO:0003677
Lele11g0373 374 SMART HOX_1 186 248 IPR001356 GO:0003677
Lele11g0373 374 SMART halz 244 288 IPR003106 GO:0006355|GO:0043565
Lele11g0373 374 MobiDBLite consensus disorder prediction 39 74 - -
Lele11g0373 374 CDD homeodomain 188 245 IPR001356 GO:0003677
Lele11g0373 374 FunFam Homeobox-leucine zipper protein 18 173 249 - -
Lele11g0373 374 Coils Coil 257 280 - -
Lele11g0373 374 MobiDBLite consensus disorder prediction 1 139 - -
Lele11g0373 374 Gene3D - 192 242 - -
Lele11g0373 374 Pfam Homeobox associated leucine zipper 244 278 IPR003106 GO:0006355|GO:0043565
Lele11g0373 374 SUPERFAMILY Homeodomain-like 174 245 IPR009057 -
Lele11g0373 374 MobiDBLite consensus disorder prediction 85 110 - -
Lele11g0373 374 MobiDBLite consensus disorder prediction 19 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0373 Lele-ChrLele11 3649449 3650848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0373 108 301 Homeobox Transcription Factor Family AT3G60390 59.804 1.88e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele11g0373 Homeodomain 1.8e-15 CL0123