Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0370 ATGGAAAACCACCCCAGAAGCCCTGACACTAATCCACACCACCACAAGTGGGGGACCTTGGAGGAGCTCTTGCTTGCCCACGCCGTCCAGCGTCATGGCTTTAAGGATTGGGACGCCGTCGCCCTGGAGGTTCAGACCCGAACCACCCTCCCCAACCTCCTCGTTACCCCCCATCACTGCCGTCAGAAATTCCTCGATCTCAGACGCCGATTCGCCGCCCACCGCGACGACGCCGTCCCCGACAACGTCGCCGCCGGGGACGACGTCGATCATGTTCCCTGGCTTGACGAATTAAGGAAGCTACGCGTCGCTGAACTCCAGGCAGCCGTCCAGCGTTCCGACCTGAAGGTGAAGAAGTTGGAGGAGGAGAGAGGGAAGAGTTTGAAGGAAAACGTCGGACAAGAGGGAGAAAAACCGGATCTGGCCGGCTCCGGCGACCTGAAACCGCAAAACGACAAAAAAGGCGGACCTGAAAAGGTTCCTGAGCCGGCGAATGCCGAACCGGCAACGCGGCTCGACGAGGATCATAATATTAAGCAACCAGCAAGTGACGAATCTGACCGGGACAACCAGTCCGTGAACGAGTCTAACTCGACGGTTTCCGTTGGGAAAACCGGGGAGGCAGAAGTTAAACTAGAACCGAACCCGGTCCATACCGGCCCGAATGAACCGGATGCGGTCGAGAGGAAGCGCAATCCGCTCGGAGAAGAATCTAATAACGGAAGCTACGATGCAGCGGCGAAAGTGCCAACGGGTGATTCACTTCCCCCGAGCGAGGAGAGGAAGGTGGAGGACTCGTCTGAGTTGCGAGACTCGGTGACGCACTCGAGGGATGATGGTGGGGAGGGAGGGACGAGGGAGAGCAGTGAGGTGCAGAGCTCGGCGAGTTTGACGAAGAAAAGAAAGCCGAGGCGGAGGAAGCAGGAGGAGGAGGAGCAGCTGGAGAACGACGAGGTGGCCGTGAAAGTTCAGCCGTTGATCGGGATGTTGGATTTAATCAAAGGTAACGATCACAGCTCATTGTTCGAGCGGCGTCTCGAGAGCCAGGAAGTAGAAAAATACAAGAACATAGTACGACAGCCAATGGATTATGAAACCATACAACGGCGACTCCGAAACGGGACTTATTCCCGCTGCACTCATGCTTTCTTCCGTGATCTCCTCCTCCTCTTCACCAACGCGGCCACTGTCTTCCCCAAAGACTCCGCCGAATCATACGCCGCACATCAGTTGGGCCACCTTGTCTCCGCTGAGATTGCACACCACATTCCGGTGATCCGACCGGAGCCACTCCCACCCAACCCATCATCGTCCTCAAAACCAAACCCTGATTCACTTTTGTCAAAACACAAAGCTTCTGCTCCTATATTGGTCTGCAGGAAACGCAGTGCTTTCTCAGCTAAACCTTCTACTTCCTCCTCTACCTTTGGCCAAAAGGGTGACTCAGCGGGTCATGAGAAGAAGAAGCCAGCTTCAGATACAAAACCACCCCCCTTGAAGCCATCTTCTTCTGATACAGATGATGAACCTCCCGCGAAAAAGGAAAAGCCGGTCACCAGAGTAAGAAGCCTGAGAAGAAGCAACAAAAACCTCACCAGCAACTCCACCAAGAAGGCAGGCACGGCCAGCAAGCCACCAGAACCGCCGAAACCAGATAAGAGCAAAGCAGAGGCTTCTGCAGGAACAGATAAAAAGAGGAGCGCAGCAGTGGATTTCTTAAAAAGGATAAAGCGAAGTGCTCCGGCGGAGTCATTGAGAAGTAGTGGTGGCAATAGCGGTGGTAATAGTAGCAAAGGTGGGGGAAGTAGTGGGAAAGATCAGAAGAAGATAACAAGTGGTGGCAAAGGGGACAAAGGGAAAGAAAAAGCGACCAAGCACGTCGGCGGCAGTAGCAGCTCTGGCGACAAAAAGAATGAGAACGAGAATAGTAGTCAATCGAAGAGGAGTGTAGGGAGGCCCCCGAAAAAAGTGGCAGAAAGTAGTAATGTTTCTGCGAAGCGTGGGAGGGAAAGTGGTGGAAAGGATAAGAGGCCCAGGAAGCGATCTAAGAGGTAA 2055 0.5411 MENHPRSPDTNPHHHKWGTLEELLLAHAVQRHGFKDWDAVALEVQTRTTLPNLLVTPHHCRQKFLDLRRRFAAHRDDAVPDNVAAGDDVDHVPWLDELRKLRVAELQAAVQRSDLKVKKLEEERGKSLKENVGQEGEKPDLAGSGDLKPQNDKKGGPEKVPEPANAEPATRLDEDHNIKQPASDESDRDNQSVNESNSTVSVGKTGEAEVKLEPNPVHTGPNEPDAVERKRNPLGEESNNGSYDAAAKVPTGDSLPPSEERKVEDSSELRDSVTHSRDDGGEGGTRESSEVQSSASLTKKRKPRRRKQEEEEQLENDEVAVKVQPLIGMLDLIKGNDHSSLFERRLESQEVEKYKNIVRQPMDYETIQRRLRNGTYSRCTHAFFRDLLLLFTNAATVFPKDSAESYAAHQLGHLVSAEIAHHIPVIRPEPLPPNPSSSSKPNPDSLLSKHKASAPILVCRKRSAFSAKPSTSSSTFGQKGDSAGHEKKKPASDTKPPPLKPSSSDTDDEPPAKKEKPVTRVRSLRRSNKNLTSNSTKKAGTASKPPEPPKPDKSKAEASAGTDKKRSAAVDFLKRIKRSAPAESLRSSGGNSGGNSSKGGGSSGKDQKKITSGGKGDKGKEKATKHVGGSSSSGDKKNENENSSQSKRSVGRPPKKVAESSNVSAKRGRESGGKDKRPRKRSKR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0370 684 MobiDBLite consensus disorder prediction 524 541 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 506 522 - -
Lele11g0370 684 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 6 684 - -
Lele11g0370 684 Coils Coil 103 123 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 584 609 - -
Lele11g0370 684 SMART bromo_6 114 424 IPR001487 GO:0005515
Lele11g0370 684 ProSiteProfiles Bromodomain profile. 334 405 IPR001487 GO:0005515
Lele11g0370 684 CDD SANT 16 48 IPR001005 -
Lele11g0370 684 CDD Bromodomain 329 419 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 548 581 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 426 448 - -
Lele11g0370 684 SUPERFAMILY Bromodomain 324 433 IPR036427 GO:0005515
Lele11g0370 684 ProSiteProfiles SANT domain profile. 16 72 IPR017884 -
Lele11g0370 684 Gene3D - 8 66 - -
Lele11g0370 684 Gene3D - 289 422 IPR036427 GO:0005515
Lele11g0370 684 MobiDBLite consensus disorder prediction 465 480 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 255 285 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 168 191 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 126 316 - -
Lele11g0370 684 MobiDBLite consensus disorder prediction 626 650 - -
Lele11g0370 684 Pfam Bromodomain 329 408 IPR001487 GO:0005515
Lele11g0370 684 MobiDBLite consensus disorder prediction 464 684 - -
Lele11g0370 684 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Lele11g0370 684 MobiDBLite consensus disorder prediction 610 625 - -
Lele11g0370 684 SUPERFAMILY Homeodomain-like 10 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0370 Lele-ChrLele11 3622772 3625592 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele11g0370 Bromodomain 7.1e-13 No_clan