Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0358 ATGTTCATGTTCTTTCCTTCTTCGTCATGGAGTGTTGAATTGAAGAAGGAGGAAGCAGCTGAAGCAGTAGCAATGGCTCCCAAGCAGAGAACACCAAAGGTGAGCAGAAATCCTGAATTGATTAGAGGGATTGGTAAGTATTCGAGGTCGAAAATGTACCACAAGAGAGGTCTCTGGGCTATCAAGGCCAAAAATGGTGGTGTTTTCCCTCGGCACGATGCCAAGCCCAAGGTCGAAGCTCCTGCGGAGAAACCTCCCAAGTTTTATCCCGCCGACGATGTCAAGAAGCCATTGGTAAACCGGCACAAGCCGAAGCCTACTAAACTCAGGTCTAGCATTACTCCCGGTACTGTGCTGATTCTTCTTGCTGGGAGATTCAAGGGAAAGAGAGTGGTTTTCCTGAAACAGCTTCCTTCTGGGTTGCTCCTTGTTACTGGTCCATTTAAGATTAATGGAGTTCCTTTGAGACGTGTTAGCCAGTCTTATGTGATCGGCACCTCCACAAAGGTTGATATTTCTGGAGTCAATGTTGAGAAATTTGACGACAAGTACTTTGCCAAGAAGACTGAGAAGAAGAAGAAGAAGGGAGAAGGAGAGTTTTTTGAGGCCGAGAAAGAGGAGAAAAATGCGATCCCCCAAGAGAAAAAGGATGACCAGAAAACCGTGGACTCTGCTTTGTTAAAAGCCATTGAGAGCGTCCCAGAATTGAAGGCTTATTTGGGTGCGAGGTTCTCTCTCAAGGCTGGCATGAAGCCTCATGAACTAGTCTTCTAA 774 0.4638 MFMFFPSSSWSVELKKEEAAEAVAMAPKQRTPKVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKVEAPAEKPPKFYPADDVKKPLVNRHKPKPTKLRSSITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDISGVNVEKFDDKYFAKKTEKKKKKGEGEFFEAEKEEKNAIPQEKKDDQKTVDSALLKAIESVPELKAYLGARFSLKAGMKPHELVF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0358 257 FunFam 60S ribosomal protein L6 111 195 - -
Lele11g0358 257 Gene3D - 111 195 IPR014722 -
Lele11g0358 257 MobiDBLite consensus disorder prediction 91 110 - -
Lele11g0358 257 PANTHER 60S RIBOSOMAL PROTEIN L6 27 257 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele11g0358 257 MobiDBLite consensus disorder prediction 199 220 - -
Lele11g0358 257 Pfam Ribosomal protein L6e 150 257 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele11g0358 257 CDD KOW_RPL6 105 257 IPR041997 -
Lele11g0358 257 SUPERFAMILY Translation proteins SH3-like domain 110 200 IPR008991 -
Lele11g0358 257 Pfam Ribosomal protein L6, N-terminal domain 27 85 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0358 Lele-ChrLele11 3556018 3559183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0358 25 257 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 84.979 5.50e-130 365