Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0352 ATGGCTCAGAGAACGGAAAAGGAAGAAACTGATTTTAAGGTGCCTGAAACCATAATCCCCTGCGTTAACAACTGCGGCGTCACCGGTAATCCGGCTACCAACAATATGTGCCAGAAGTGCTTCAACGCCACCTCCTCCGCCGCCGCCGCCGCGGCGTCCTCCCCCTCCCCCTCCTCATCGTCTGCCTCTTCCTCTGCAGCTGGAGTTTCAGCGCCTTCTAAATTCGTCGATGACAAGTCGTCTTCTAGATCTACCGCGTCTCGATCTCCTAAGAGATCCTATCCTTCCGATGAGTCTACGCAAACGCCGGATCGGGCGAAGACGGAGGAGGTGGTGCCGTCTGAAGCGAAGCGGGTGGTGAATCGGTGCTCCGGATGCCGGAGGAAGGTCGGGTTGACGGGGTTCCGGTGCCGTTGCGGGGAGTTGTTCTGTGCTGAGCATAGGTACTCCGATCGTCATGATTGCAACTACGACTACAAAGCCGCCGGACGCGAGGCGATAGCGAGGGAGAATCCTGTAGTCAAAGCTGCGAAGATCGTGAAAGTTTGA 549 0.5665 MAQRTEKEETDFKVPETIIPCVNNCGVTGNPATNNMCQKCFNATSSAAAAAASSPSPSSSSASSSAAGVSAPSKFVDDKSSSRSTASRSPKRSYPSDESTQTPDRAKTEEVVPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCNYDYKAAGREAIARENPVVKAAKIVKV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0352 182 MobiDBLite consensus disorder prediction 51 101 - -
Lele11g0352 182 Gene3D - 107 168 IPR035896 -
Lele11g0352 182 Pfam A20-like zinc finger 19 42 IPR002653 GO:0003677|GO:0008270
Lele11g0352 182 SUPERFAMILY AN1-like Zinc finger 105 176 IPR035896 -
Lele11g0352 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 59 - -
Lele11g0352 182 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 181 - -
Lele11g0352 182 ProSiteProfiles Zinc finger AN1-type profile. 117 163 IPR000058 GO:0008270
Lele11g0352 182 Gene3D - 1 67 - -
Lele11g0352 182 Pfam AN1-like Zinc finger 123 160 IPR000058 GO:0008270
Lele11g0352 182 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Lele11g0352 182 SMART AN1_Zf_4 123 160 IPR000058 GO:0008270
Lele11g0352 182 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Lele11g0352 182 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 104 - -
Lele11g0352 182 FunFam Zinc finger AN1-type containing 6 95 178 - -
Lele11g0352 182 MobiDBLite consensus disorder prediction 51 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0352 Lele-ChrLele11 3528890 3529438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0352 8 182 C2H2 Transcription Factor Family AT3G52800 38.251 1.01e-31 110