Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0346 ATGATCAAGGCGATTTGTGTTTGCGGCATTATTTGCTGTTTGGCGATGGATGACGGAGTGCCTCCAAGCCTTTTTGTTAACGACGGTTCATTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGGGAAGAAAAATGAAAAATTAGAGGATTCTAAACCCATTAAAATTGTTTCAGGGTCTTTGACTCCTAATATTTCCATTAGTAAAAAGAACTCTGCAGACTTGAAGGCTAATACACAGAAAACATCTCGGGCTGTTTCCAGCGGCAAACTTGCATTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCTCCATCTGTTAAGTTGAGTGGAGATGAAGAAGAAGAAACTGATGTTAGTAATGTTTCGAGTGATGCGCCTCTAAAACGACAAAAGTTGGGGCTTGAAGATGGCATTGAGCGATCATCAAGACAATCTGATGATGCACCTCCTTCCCCACGTGATCCTACAGTGAAGAAAGTTGCTGAGAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGGCAAAAAAATCCAGGGAATACGCCTTTCAAGTTTTTATTTGACGAGAAATGTGCTGACTACAAATATTACAAATATCTACTAGCTCAAGAGGAAAAGGCTCTAGGGAAGCCTTGGGAATCACAGACATCACATAATGGGGGTACAAACTCCTCGTCTTCTAGGCCAACCAATGTTCCTCGGAGATCATCTCAGCAGCATTCAACTTACCAAATTCCTGCATCTGCTCTGTATGAAAGTCCTGAAGATCGCGGAGTTTATGGATCTTCAGGTCAAGCAGCATCAGGAGGAAGTGCTAATGAACCTGGTGGATCATCAAATGCTGATTCTTTGGCATTAATGGAGTTCTACATGAAGAAAGCTGCACAGGAAGAGAAGATGAAAAAACCTAAGCAATCTAAAGATGAAATGCCCCCTCCTGCATCCCTTCAAGCTTCTTCTAAAAAAGGTCATCACATGGGTGATTACATTCCCCAAGAAGAGCTAGAGAAGTTCTTGGCTACCTGTAATGATGCAGAAGCGCAGAAATCTGCCAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGTCACAAGCTTTTGTCAAAAATGGGATGGAAAGAAGGGGAGGGTCTTGGCAGCTCCAGGAGTGGTATTTCCGATCCAATCATGGCCGGTAATGTTAAGATGAACAACTTGGGGGTTGGTGCAAACAACCCTGGGGAGGTGACTTCTGAAGACGACATATACGAGCAGTACAAAAAGAGGATGATGCTCGGCTACCGTTACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA 1359 0.4327 MIKAICVCGIICCLAMDDGVPPSLFVNDGSFMERFKQLQQEQGKKNEKLEDSKPIKIVSGSLTPNISISKKNSADLKANTQKTSRAVSSGKLAFSLKQKSKLVPPSVKLSGDEEEETDVSNVSSDAPLKRQKLGLEDGIERSSRQSDDAPPSPRDPTVKKVAEKLASFVAKNGRQFEDVTRQKNPGNTPFKFLFDEKCADYKYYKYLLAQEEKALGKPWESQTSHNGGTNSSSSRPTNVPRRSSQQHSTYQIPASALYESPEDRGVYGSSGQAASGGSANEPGGSSNADSLALMEFYMKKAAQEEKMKKPKQSKDEMPPPASLQASSKKGHHMGDYIPQEELEKFLATCNDAEAQKSAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRSGISDPIMAGNVKMNNLGVGANNPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0346 452 MobiDBLite consensus disorder prediction 105 158 - -
Lele11g0346 452 Pfam Surp module 161 210 IPR000061 GO:0003723|GO:0006396
Lele11g0346 452 Gene3D Surp module 142 215 IPR035967 GO:0003723|GO:0006396
Lele11g0346 452 SMART G-patch_5 367 414 IPR000467 GO:0003676
Lele11g0346 452 MobiDBLite consensus disorder prediction 271 287 - -
Lele11g0346 452 SMART surpneu2 159 213 IPR000061 GO:0003723|GO:0006396
Lele11g0346 452 ProSiteProfiles SURP motif repeat profile. 161 204 IPR000061 GO:0003723|GO:0006396
Lele11g0346 452 SUPERFAMILY Surp module (SWAP domain) 149 211 IPR035967 GO:0003723|GO:0006396
Lele11g0346 452 MobiDBLite consensus disorder prediction 130 158 - -
Lele11g0346 452 Pfam G-patch domain 370 413 IPR000467 GO:0003676
Lele11g0346 452 MobiDBLite consensus disorder prediction 215 288 - -
Lele11g0346 452 ProSiteProfiles G-patch domain profile. 369 416 IPR000467 GO:0003676
Lele11g0346 452 MobiDBLite consensus disorder prediction 302 331 - -
Lele11g0346 452 MobiDBLite consensus disorder prediction 217 255 - -
Lele11g0346 452 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 19 452 IPR040169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0346 Lele-ChrLele11 3495448 3499898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0346 358 425 C2H2 Transcription Factor Family AT5G26610 40.580 2.66e-08 53.5