Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0332 ATGATAATGGGGAGGGACAAGAACGGTAGTAAGAACAATAACAACAACAACGTTGTGAAGCTAAGGAAGGGGTTGTGGTCGCCGGATGAAGATGAGAAGCTAATAAGGTACATGTTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAATGCAGGCCTTCAACGTTGTGGCAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTTAAGAGAGGTGCTTTCTCTCTCCAAGAAGAACAACTCATTCTTCATTTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCAGGACGCACAGACAATGAGATTAAGAATTTCTGGAACTCTACTTTGAAGAAAAGGATGAAAAACAACACTACTTATACTTCGGCTGCTACTGCTACTGCAACTCCATCACCAAACAACAGCACAGATTCATCATCAAAACATCATAGTATTCTGAATGGCGCCGCCGCCGCCGCCTCCACCGCTTCTTCCATGCCCTTCATGAACATGACCATGTGCATGGACTCATCACCTTCATCAATATCATCATTTTCGTCAGCGCCCGTACAATCAATGCAAACCGCGGCCGCTTTTGGTGGTGGTGGTGACCACCAGTTAATGGAGTATCCCTTTTCCATGTTGAATAATAATAACTGTCATATTCCTTATGACATGTCTGCATGCTTAACCCAGGTTGGTGGTGGCCATGGCATGGTGGAGCATGGGTTTTATGGTGAAGATTATAATAATAATAATAATGGAATGGTATTAGAGGGAGAAGACAGTAGAATAATGGGGTTAGAAAGAGACCTGCGTCTTCCTCCTCTTGAGAGGAGAAGCATGGAAGAGAAGTATAATAGTACTGGTGGTGTTATTGATCATGTGAGAAGTCATATCGTCAACAACAACCATTTTAATAATGGTTTCTTCAATCACACTGATCATCACCATCAGGACTTGGTTGGGTTTGGAAATAATAATAATAATAATAATCATGGGCAATCAGGGGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATATCCTCTATTCCTTTCCTTGATTTCCAAGTTGAATGA 1110 0.4216 MIMGRDKNGSKNNNNNNVVKLRKGLWSPDEDEKLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNTTYTSAATATATPSPNNSTDSSSKHHSILNGAAAAASTASSMPFMNMTMCMDSSPSSISSFSSAPVQSMQTAAAFGGGGDHQLMEYPFSMLNNNNCHIPYDMSACLTQVGGGHGMVEHGFYGEDYNNNNNGMVLEGEDSRIMGLERDLRLPPLERRSMEEKYNSTGGVIDHVRSHIVNNNHFNNGFFNHTDHHHQDLVGFGNNNNNNNHGQSGENLRMGEWDLEGLMQDISSIPFLDFQVE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0332 369 FunFam MYB transcription factor 20 76 - -
Lele11g0332 369 CDD SANT 26 70 IPR001005 -
Lele11g0332 369 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
Lele11g0332 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 70 IPR017930 -
Lele11g0332 369 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Lele11g0332 369 SMART sant 75 123 IPR001005 -
Lele11g0332 369 SMART sant 22 72 IPR001005 -
Lele11g0332 369 MobiDBLite consensus disorder prediction 134 154 - -
Lele11g0332 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Lele11g0332 369 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Lele11g0332 369 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Lele11g0332 369 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Lele11g0332 369 CDD SANT 78 121 IPR001005 -
Lele11g0332 369 PANTHER MYB DOMAIN PROTEIN 55 16 305 - -
Lele11g0332 369 Gene3D - 77 153 - -
Lele11g0332 369 Gene3D - 20 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0332 Lele-ChrLele11 3386130 3389139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0332 15 369 MYB Transcription Factor Family AT3G08500 45.531 7.64e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele11g0332 Myb_DNA-bind_6 7.2e-13 CL0123