Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0293 ATGAGCACACAAACTTGCTGCTGGGTCCTTTTCCTTCTCTCAACACTACTCTTTGTGGATGAAATCCATGGAAGCAGAAAGCAAGAACAAGCTCTCAGGAATCTGAACAAGGCCAAGTTCTGGGGAGGTTCCATTGACAGAAGCAGTGAAACGATCTTGGAGGTAGATAATAATAAGGCTGTGTTTGGCGACTTTGATGATGATAAGTCTCGTTACTATTCTCCTCAACAAGGTTTGAAAGAGAAAGATAGGATTGAGAGACTTCCAGGGCAACCTCGAGGTGTGAGTTTCTCTCAGTATGGAGGATATGTGACTGTAGATAAAATTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAAGCTCAACAATCTCACCATAGCCACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGATGTTCATCACTTGCGTATGGAGCAATGCAAGAACTTGGACCATTCCGAGTAAACAGCGATGGCAAAACACTTCACCCCAACAAACACTCTTGGAACCATGCTGCAAATGTATTGTTTTTAGAATCACCAGCTGGAGTGGGATTTTCGTATTCAAACAGAACATCGGATTATGACAACAATGGGGACAGAAAAACTGCTTCAGACAACTATGTGTTCTTGAGGAACTGGTTGGAGAGGTTTCCTGAATATAAGAATTCAGATTTCTACATTGCTGGAGAGAGCTATGCAGGCCACTATGTTCCTCAACTTGCTCATACCATTCTCCATCACAATGACCATCCCAATTCCTCCTTCTTTATCAACCTCAAAGGCATCTTGATAGGGAATGCAGTGATAAATGATGGGACAGATAGCAAAGGAATGTGGGATTTTTTGGCAAGCCATGCCATAATATCAGACCAAGCAGCTAATGATGTGAACAAATTATGTGATTTCTCAGAGGTTGCCTCAAACCAGAGCACTGAATGCATGTCAGCTTCTGATGAAATAGATAGAGATATTGACTTCATTGATATTTACAACATCTATGCTCCTCAATGCCTTGATTCCAACCTCACTTCCCTCCCTAAGCCTCCCTCTGTAGTGACAGACCCATGTAGTGATACTTATGTATATGCATACTTGAACCGAGCTGAGGTACAAGAGGCATTGCATGCCAATGTGACAAAGCTCACACATGACTGGGAGCCTTGCAGCGATGTTATCTCTCGATGGGTCGATAGTGCTTCCACTGTGCTTCCCCTCTTGCATGAGTTCCTCAATCATAGCCTTCAAGTTTGGATCTTTAGTGGAGACGTAGATGGGAGAGTGCCAGTAACTTCAACTAAGTATTCTATTGAGAAAATGAATCTTCCAGTTAAGACTAATTGGCATCCCTGGTTCGTGAATGGAGAGGTAGGAGGATACACAGAGGTGTATAAGGGAGGATTAACATTTGCAACAGTAAGAGAAGCAGGACATCAAGTGCCAAGTTATCAGCCAGCAAGAGCTCTTGCTTTAGTCAATCACTTCTTAAAAGGCATCCCTCTTCCTAATACCACCCCACGTACCCCTAACTTGTAG 1545 0.4291 MSTQTCCWVLFLLSTLLFVDEIHGSRKQEQALRNLNKAKFWGGSIDRSSETILEVDNNKAVFGDFDDDKSRYYSPQQGLKEKDRIERLPGQPRGVSFSQYGGYVTVDKIAGRAFYYYFVEAQQSHHSHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHPNKHSWNHAANVLFLESPAGVGFSYSNRTSDYDNNGDRKTASDNYVFLRNWLERFPEYKNSDFYIAGESYAGHYVPQLAHTILHHNDHPNSSFFINLKGILIGNAVINDGTDSKGMWDFLASHAIISDQAANDVNKLCDFSEVASNQSTECMSASDEIDRDIDFIDIYNIYAPQCLDSNLTSLPKPPSVVTDPCSDTYVYAYLNRAEVQEALHANVTKLTHDWEPCSDVISRWVDSASTVLPLLHEFLNHSLQVWIFSGDVDGRVPVTSTKYSIEKMNLPVKTNWHPWFVNGEVGGYTEVYKGGLTFATVREAGHQVPSYQPARALALVNHFLKGIPLPNTTPRTPNL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0293 514 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Lele11g0293 514 Gene3D - 406 501 - -
Lele11g0293 514 Pfam Serine carboxypeptidase 89 501 IPR001563 GO:0004185|GO:0006508
Lele11g0293 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Lele11g0293 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Lele11g0293 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 471 484 IPR001563 GO:0004185|GO:0006508
Lele11g0293 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Lele11g0293 514 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 488 IPR001563 GO:0004185|GO:0006508
Lele11g0293 514 FunFam Carboxypeptidase 357 504 - -
Lele11g0293 514 Gene3D alpha/beta hydrolase 79 342 IPR029058 -
Lele11g0293 514 FunFam Carboxypeptidase 406 501 - -
Lele11g0293 514 Gene3D - 360 397 - -
Lele11g0293 514 SUPERFAMILY alpha/beta-Hydrolases 85 505 IPR029058 -
Lele11g0293 514 FunFam Carboxypeptidase 79 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0293 Lele-ChrLele11 3060278 3068129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0293 368 504 Calmodulin-binding Proteins AT2G22960 29.927 1.52e-15 73.2