Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0292 ATGGCAATGGCCAAACAAACTTGGTGGGTCCTTTTATTCCTTCTCTCAACACTACTCTTGGTAGATGGGATCCATGGAAGCAGAAAGCAAGGACAAACTCTCAAGAATCTGAACAAGGCCAAGTTCAGAGGAGGCTCCGTTGACAGAAGCAGTGAAACAATCTTGGAGGTAGATAATAAGGCCGTGTTTGGCAACCATGATTATGATAAGTCTCGTTACTATTATCTTCAACAAGGACTGAAAGAGAAAGATAGGATAGAGAAACTTCCAGGGCAACCTCAAGTTGTGAGTTTCTCTCAGTATGGAGGATATGTCACTGTGGATAAGATTGCAGGAAGAGCTTTCTATTATTATTTTGTTGAAGCTCCACAATCTCATCATACCCACAAATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGGTGCTCATCTTTAGGGTATGGAGCAATGCAAGAACTGGGACCATTCCGAGTAAACAGTGATGGCAAAACACTTCAAACAAACAAATACTCTTGGAACTATGCTGCAAATGTATTGTTTTTGGAATCACCTGCTGGAGTGGGATTTTCATATTCAAACAAGACATCAGATTATGACAATAATGGAGACAGAAGAACAGCTACAGATAACTATGTGTTCTTGAGGAATTGGTTGGAGAGGTTTCCTGAATATAAGAATTCTGATTTCTACATTGCTGGAGAGAGCTATGCAGGCCACTATGTTCCTCAACTTGCTCATACCATTCTCCATCTCAACAACCATCTCAATTCCTCCTTCATCATCAACCTCAAAGGAATCTTGATAGGGAATGCAGTGATAAACGATGAGACGGACAACAGAGGAAGATGGGATTTCTTGGCAAGCCATGCCATAATATCAGACAAAGCAGCGCATGCTGTAAGCAAATTGTGTGATTTCTCAGAGACTGCGTCATCTTCTGATCAAGACAATGAATGTACAGAAGCGTCAAATGAAATAGAGAAAGACACTGGCTCCATAAATATATACAACATCTATGCTCCTCAATGCCATGATTCTGATCTCACTGCCATCCCTAAGCCCCCTTCTATAGTAGCGGATCCATGTATTGATGATTATGTGTATGAATATATGAACCGTGTTGAGGTGCAAGAGGCACTACATGCCAATGTCACAAAGTTGAGTCATGATTGGGAACTTTGCAGCGATGTCATCACCAAGTGGGTTGATAGCCCTTCCACTGTGCTTCCTCTTTTGAAAGAGTTCCTCAACCACAGCCTAAGGGTCTGGATATTTAGTGGTGACTTTGATGGAATGGTGCCAGTTACTTCAACAAAGTATTCCGTGGACAAGTTAAAACTCCCTCTTAAGACCATGTGGCACCCCTGGTTCCTCAATGGAGAGGTAGGAGGGTATACAGAGGTATATAAGGGAGGCTTAACGTTTGCTACAGTGAGAGGAGCAGGGCACGAAGTGCCAAGCTACCAGCCAGCAAGAGTCCTTTCTTTGGTCAACCACTTCTTGAAAGGCACCCCTCTTCCCAAGACCACTCCCTCCACACCCATGATCTGA 1554 0.4324 MAMAKQTWWVLLFLLSTLLLVDGIHGSRKQGQTLKNLNKAKFRGGSVDRSSETILEVDNKAVFGNHDYDKSRYYYLQQGLKEKDRIEKLPGQPQVVSFSQYGGYVTVDKIAGRAFYYYFVEAPQSHHTHKLPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLQTNKYSWNYAANVLFLESPAGVGFSYSNKTSDYDNNGDRRTATDNYVFLRNWLERFPEYKNSDFYIAGESYAGHYVPQLAHTILHLNNHLNSSFIINLKGILIGNAVINDETDNRGRWDFLASHAIISDKAAHAVSKLCDFSETASSSDQDNECTEASNEIEKDTGSINIYNIYAPQCHDSDLTAIPKPPSIVADPCIDDYVYEYMNRVEVQEALHANVTKLSHDWELCSDVITKWVDSPSTVLPLLKEFLNHSLRVWIFSGDFDGMVPVTSTKYSVDKLKLPLKTMWHPWFLNGEVGGYTEVYKGGLTFATVRGAGHEVPSYQPARVLSLVNHFLKGTPLPKTTPSTPMI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0292 517 FunFam Carboxypeptidase 79 354 - -
Lele11g0292 517 Gene3D alpha/beta hydrolase 80 346 IPR029058 -
Lele11g0292 517 FunFam Carboxypeptidase 361 507 - -
Lele11g0292 517 ProSitePatterns Serine carboxypeptidases, serine active site. 232 239 IPR018202 GO:0004185
Lele11g0292 517 SUPERFAMILY alpha/beta-Hydrolases 86 508 IPR029058 -
Lele11g0292 517 Gene3D - 363 400 - -
Lele11g0292 517 ProSitePatterns Serine carboxypeptidases, histidine active site. 474 491 IPR033124 GO:0004185
Lele11g0292 517 FunFam Carboxypeptidase 409 504 - -
Lele11g0292 517 Pfam Serine carboxypeptidase 90 504 IPR001563 GO:0004185|GO:0006508
Lele11g0292 517 Gene3D - 409 504 - -
Lele11g0292 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 192 IPR001563 GO:0004185|GO:0006508
Lele11g0292 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Lele11g0292 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 218 243 IPR001563 GO:0004185|GO:0006508
Lele11g0292 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 181 IPR001563 GO:0004185|GO:0006508
Lele11g0292 517 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 85 491 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0292 Lele-ChrLele11 3053755 3057461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0292 383 507 Calmodulin-binding Proteins AT2G22960 29.104 3.40e-15 72.4