Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0280 ATGGAGCAGTACCTCAGAGAAAACTTTGATGTCTCGTCCAAGCGGCCCTCCGAGGCCGCCCTCCTCCGCTGGAGATCTGCCGTCGCTATCGTCAAGAATCCTCGCCGCCGCTTTCGCATGGTCGCTGACCTCGCCAAGCGCGCCGAGGCTGAGAAGAAGCGCAAGAACCTCCAGGAAAAAGTACGAGTGGCTCTCTATGTGCAAAAGGCTGCATTGCAGTTTATTGACGCTGGGCAGCGTGGTGCATCGACCATAATCTCCAGAGAGGTCAGAGAATCAGGTTTTGCTAGTGAGCCCGACGAATTAGCATCCCTATGCCGATCACATGATAAAAAAGCCTTAGAACATAGTGGAGGAGTAGAAGGATTGGCAAAAGCAGTTGATGTGTCACTAAAAGAAGGTGTTAGGTCAAGTAATGTTCCTCATAGACAAAACATCTTCGGTTCTAACACCTTTGCTGAGAAGCCGTCAAGAGGATTTTGGATGTTCGTTTGGGATGCAATGCAAGACATGACTCTCATTATCCTTTTGTTATGTGCTCTAGTTTCAATAGGAGTTGGAATCCCAACCGAAGGTTTCCCAAAAGGTTTATATGATGGCGTGGGAATCGCACTCTCTATTCTCTTAGTTGTCTTCGTCACTTCAGTTAGTGACTATAAACAGTCTCTGCAATTCAAAGATTTGGAAAATGAGAAGAAGAATGTTACCATTCAAGTCATTAGAGATGGGAACAGACAAAAGATTTCAATCTATGAGTTAGTGGTAGGAGATATTGTTCATTTATCAATTGGAGACGTAGTTCCTGCAGATGGAGTATTCATATCAGGTTACAGCTTATTAATTGATGAATCAAGCTTATCAGGGGAGAGCGAGGCAGTCCATGTCGACCAAAATGCTCCATTTCTTCTAGCTGGGACCAAAGTACAAGATGGATCTGCTAAGATGCTAGTGACTTCTGTTGGTATGAGAACTGAATGGGGAAGATTAATGGATACTCTGAACGAAGTGGGAGACGATGAAACACCATTGCAGGTCAAATTAAATGGGGTTGCAACCATAATTGGAAAGATTGGCTTGGTTTTTTCCCTGATGACATTCTTGGTTCTAAGTGGCAGATTTTTGCTGCGTAAAATAGTTCATAATGAAATTAGCCAATGGTCCTTACACGACGCATCTGAGCTTCTCAATTTCTTTGCGACTGCTGTGATTATAATAGTTGTGGCAGTTCCAGAGGGGCTTCCTTTGGCAGTGACGCTAAGCCTTGCGTTCGCAATGAAGAAATTAATGAACGAAAAGGCACTTGTCAGGCACCTCTCTGCATGCGAGACGATGGGCTCAGCTGGTTGTATTTGCACGGACAAAACAGGAACTTTGACAACAAACCACATGGTCGTACATAAAATATGGATTTGCGGACAAACTAAGGAGATGAAAAACAATAACAGTAAGAATTATTGGTTAAAGTCGTCTTTTTCTCAACAAATATTTGACCTCTTTTTGCAGTCAATATTTCAGAATACTGGCTCAGAGGTGGTCAAAGGTGAAAAGGGGGACATTAAGGTTATGGGTACTCCGACAGAGAAGGCATTGCTGGAATTTGGGTTGCTTGCTGGAGGTGAACCTAAGGTTTATAATGACAAGTATAAGATCTTAAAGGTCGAACCATTCAATTCCAACAGAAAAAGAATGTCGGTACTCGTGGCTTTTCCTGGTGCTGCCAATAATAGGTCTAGAGCATTCTGTAAGGGAGCATCAGAAATAGTTCTGGAAATGTGCGACAAACTTGTGGATTCAAATGGCAAAGTTGTTCGTCTGTTCGAAGAACAAAGAAAGGACATCACAAAAGTTATCCATAATTTTGCTTCTGAAGCTCTAAGAACTCTCTCTGTCGCCTTTAAAGATATCGAGGGAACTACTTCTGATATTCCTGAGGAGAATTTTACATTGTTGGCTATTGTCGGGATCAAGGATCCTGTGAGGCCTGGAGTAAAAGAAGCCGTAGAAACTTGTAAAGCAGCTGGTATTTCAGTAAAGATGGTAACTGGTGATAACATCATTACTGCTAAAGCAATAGCTAGAGAATGCGGAATCTTAACAGATGGGATAGCCATCGAAGGACCCGAATTTCGTAGGAAGACCCAGCACGAAATGGAGGAGATAATACCAAAAATACAGGTTATGGCTCGATCTTTGCCTCTGGACAAGCACACTTTAGTGACCCATTTGAGGAAGGACTTCGACGAAGTTGTTGCAGTAACTGGTGATGGGACCAACGATGCTCCAGCATTGCGTGAGGCGGATATTGGCCTTGCTATGGGCATAGCAGGAACCGAGGTCGCAAAAGAAAATGCGGACGTCATTGTAATGGATGATAACTTCACAACCATACTAAACGTTGCTAGATGGGGTCGTTCTGTCTACATCAATGTTCAGAAGTTTGTTCAATTCCAATTAACGGTTAATGTTGTAGCTCTCATCCTCAATTTTGTTTCCGCTTGTGTATCAGGTTCTGCTCCTCTTACTGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTTGGTGCTTTGGCTCTTGCTACAGAACCTCCCCATGACGGGCTGATGAAAAGACCACCGATTGGAAGGAATGTCAAACTCATAACCGGCATCATGTGGAGGAATATAATTGGTCAGAGCCTCTATCAGATAACTGTCCTTTTGGCTCTCAAATTCCGTGGTAAACAGATTTTGAAGCTTCTTAATCATGATGCAACCTCTGTTCTGAATACTCTCATATTCAACGTCTTCGTATTTTGCCAGGTATTCAACGAAATAAACAGCCGTGACATGGAGAAGATCAATGTTTTCCGAGGCATGTTCAGTAGTTGGATCTTCCTTGGAGTTTTGGCCTCAACAATATGTTTCCAAGTCATGCTCGTTGAATTTCTGGGTACTTTTGCTCAAACGGTACCACTATGCTGGGACCTATGGCTAGCCAGTGTCTTAATTGGTGCAGTGAGCTTACCCTTAGCTGCCATTGTCAAATGCATTCCCGTTCCAGTGGCTCGTTACATGGACCGTCATCATCATCATGATTACGTACCCATCCCAAGTGGCCCAGAGATGGCATGA 3117 0.435 MEQYLRENFDVSSKRPSEAALLRWRSAVAIVKNPRRRFRMVADLAKRAEAEKKRKNLQEKVRVALYVQKAALQFIDAGQRGASTIISREVRESGFASEPDELASLCRSHDKKALEHSGGVEGLAKAVDVSLKEGVRSSNVPHRQNIFGSNTFAEKPSRGFWMFVWDAMQDMTLIILLLCALVSIGVGIPTEGFPKGLYDGVGIALSILLVVFVTSVSDYKQSLQFKDLENEKKNVTIQVIRDGNRQKISIYELVVGDIVHLSIGDVVPADGVFISGYSLLIDESSLSGESEAVHVDQNAPFLLAGTKVQDGSAKMLVTSVGMRTEWGRLMDTLNEVGDDETPLQVKLNGVATIIGKIGLVFSLMTFLVLSGRFLLRKIVHNEISQWSLHDASELLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNEKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVHKIWICGQTKEMKNNNSKNYWLKSSFSQQIFDLFLQSIFQNTGSEVVKGEKGDIKVMGTPTEKALLEFGLLAGGEPKVYNDKYKILKVEPFNSNRKRMSVLVAFPGAANNRSRAFCKGASEIVLEMCDKLVDSNGKVVRLFEEQRKDITKVIHNFASEALRTLSVAFKDIEGTTSDIPEENFTLLAIVGIKDPVRPGVKEAVETCKAAGISVKMVTGDNIITAKAIARECGILTDGIAIEGPEFRRKTQHEMEEIIPKIQVMARSLPLDKHTLVTHLRKDFDEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKENADVIVMDDNFTTILNVARWGRSVYINVQKFVQFQLTVNVVALILNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNVKLITGIMWRNIIGQSLYQITVLLALKFRGKQILKLLNHDATSVLNTLIFNVFVFCQVFNEINSRDMEKINVFRGMFSSWIFLGVLASTICFQVMLVEFLGTFAQTVPLCWDLWLASVLIGAVSLPLAAIVKCIPVPVARYMDRHHHHDYVPIPSGPEMA 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0280 1038 Pfam Cation transporting ATPase, C-terminus 838 1011 IPR006068 -
Lele11g0280 1038 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Lele11g0280 1038 CDD P-type_ATPase_Ca_PMCA-like 142 886 - -
Lele11g0280 1038 Gene3D - 166 1012 - -
Lele11g0280 1038 Gene3D - 448 798 IPR023214 -
Lele11g0280 1038 SUPERFAMILY Calcium ATPase, transduction domain A 235 332 IPR008250 -
Lele11g0280 1038 FunFam Calcium-transporting ATPase 461 658 - -
Lele11g0280 1038 Pfam Cation transporter/ATPase, N-terminus 115 183 IPR004014 -
Lele11g0280 1038 Pfam E1-E2 ATPase 235 430 - -
Lele11g0280 1038 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 663 IPR023299 GO:0000166
Lele11g0280 1038 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele11g0280 1038 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele11g0280 1038 PRINTS H+-transporting ATPase (proton pump) signature 613 631 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele11g0280 1038 Coils Coil 40 60 - -
Lele11g0280 1038 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1014 IPR023298 -
Lele11g0280 1038 FunFam Calcium-transporting ATPase 770 1016 - -
Lele11g0280 1038 FunFam Calcium-transporting ATPase 16 76 - -
Lele11g0280 1038 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Lele11g0280 1038 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Lele11g0280 1038 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Lele11g0280 1038 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Lele11g0280 1038 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Lele11g0280 1038 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Lele11g0280 1038 FunFam Calcium-transporting ATPase 212 334 - -
Lele11g0280 1038 SFLD p-type atpase 433 805 IPR044492 -
Lele11g0280 1038 Gene3D - 461 658 IPR023299 GO:0000166
Lele11g0280 1038 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 107 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele11g0280 1038 Gene3D - 16 77 - -
Lele11g0280 1038 SUPERFAMILY HAD-like 450 858 IPR036412 -
Lele11g0280 1038 Gene3D - 134 334 - -
Lele11g0280 1038 PANTHER CATION TRANSPORTING ATPASE 82 1014 - -
Lele11g0280 1038 FunFam Calcium-transporting ATPase 652 798 - -
Lele11g0280 1038 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Lele11g0280 1038 Pfam haloacid dehalogenase-like hydrolase 449 767 - -
Lele11g0280 1038 SMART Cation_ATPase_N_a_2 114 188 IPR004014 -
Lele11g0280 1038 SFLD Haloacid Dehalogenase 433 805 - -
Lele11g0280 1038 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 549 699 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele11g0280 1038 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 719 841 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele11g0280 1038 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 203 482 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0280 Lele-ChrLele11 2952339 2958505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0280 57 1035 Primary Pumps ATPases AT3G57330 67.074 0.0 1348