Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0275 ATGGATCCCAGAAATTGCCATTGCACAAGACAGGAGTGGTTTGTATCTTGTGATGTTAAAATGTGCAAGAAGAAGAGCTGGTTTTCTCTGATAAAGAGGCTTTTTAGATGGGACACAACACAGTCTGAACAAGGCAAGAAGGAGAAGAGAAGAGAATGGTTATATGGTAGGATGAAGGTTAAGAGATTAACTCCAATTGCTGTTCCATCAAAGGAAACCATAATGCTAGGTGGTGAAGAAGATGAAGAACAGAGGAAGAATGCTTTATCAGGGAACAAAAATTCTGCAGCCATCAGAATCCAATCTGCATTTAGGGGTTACCTAGCAAGGAAGGCATTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATTATTAGAGGAACAGCAGTGAGACGCCAAGCTCTGAGGTCCCTCAAGTGTTTGCAGTCAATTGTTAGCATCCAATCACAAGCCTCTGCTTCAAGGAGACTTCAATTGCTTGAAGCCAGATCTCTCCATGATCCCCAAGCCTTCCATGGTTTAAGGGACAAGATAATAAGGATGGATTCAAACGGTGAAAAAAGGTGGGATGACAGCATTTTGCTGAAGGAAGCAGTAGAGACGTCATGCATGAACAAGAAAGAAGCTCTTCTCAAAAGAGAGAGAATAAAACAGTACTCATTTAACCATCGAATGTCTGCAGAAACAGAAAGAAACAGAGTAAATGGAAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACCCAACTTTCTAAGAGCAAAGAGCTTGAAGATTTAGACAGTACAACTTTCAGCTCTCATTACAGAGGTGAAAAAGATAATAATGGAGGAGGAAGATCACTTAAACTGAGAAATCCTGAGATTCAGAGGCAAATAAATCAGATTGAAGAAGGGTTGAACTGTCACAAAATTCGGTGTTCTTCAGTGGGAAGAGAAGAAAACTACTCATCCACAAGCTCTCCTGTGATAACACCCACTTACATGGCAGCAACTGAATCAGCAAAAGCCAAAGCAAGATCCATAAGCTCCCCAAGATTATGGGCATGGAATAGTAATTTGGCGACTGATTCTGATTATAGCTATTCATCACCATGCAAGAAAAAGCGACCTCTTGTATCTTCTGTTAACTCTACTACTAGTGAGGTTTTTGGTAGTACTAGGAGTGGCAGTAATTATAAGCAAATATCTCCTAGGTTAAAGGGTACAGGAGTTTCAGTGATGAATAAGGTTTGA 1236 0.4078 MDPRNCHCTRQEWFVSCDVKMCKKKSWFSLIKRLFRWDTTQSEQGKKEKRREWLYGRMKVKRLTPIAVPSKETIMLGGEEDEEQRKNALSGNKNSAAIRIQSAFRGYLARKALRALKGIVKLQAIIRGTAVRRQALRSLKCLQSIVSIQSQASASRRLQLLEARSLHDPQAFHGLRDKIIRMDSNGEKRWDDSILLKEAVETSCMNKKEALLKRERIKQYSFNHRMSAETERNRVNGRWRYWLEQWVDTQLSKSKELEDLDSTTFSSHYRGEKDNNGGGRSLKLRNPEIQRQINQIEEGLNCHKIRCSSVGREENYSSTSSPVITPTYMAATESAKAKARSISSPRLWAWNSNLATDSDYSYSSPCKKKRPLVSSVNSTTSEVFGSTRSGSNYKQISPRLKGTGVSVMNKV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0275 411 Gene3D - 90 144 - -
Lele11g0275 411 Pfam Protein of unknown function (DUF4005) 308 385 IPR025064 -
Lele11g0275 411 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Lele11g0275 411 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Lele11g0275 411 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Lele11g0275 411 PANTHER IQ-DOMAIN 5-RELATED 73 370 - -
Lele11g0275 411 SMART iq_5 92 114 IPR000048 GO:0005515
Lele11g0275 411 SMART iq_5 115 136 IPR000048 GO:0005515
Lele11g0275 411 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0275 Lele-ChrLele11 2914728 2917682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0275 21 408 IQD Protein Family AT5G13460 41.609 1.52e-85 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0273 09 1920449 1929333 Lele11g0275 11 2914728 2917682 hybridization