Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0267 ATGGAGAAGGATGCTCGGGTTCGGTGCTCGGAGAACGAAGAGCTTGCAGCTTACTTGTTCGATAAATGGAAAGAATTGGCAGAGAAACCAAAAGGGATTTCAGAAAACATTGAAAAGACTCTGTCTAAAGCTTACTACAATGTCTGTAACTCGACAACTCCCATTCAAACCATGAAGGACCTTTCCGAGGTCAAGGGCGTGGGAAAATGGATTTTGAAGCTCATGCAGGGATTTTTTGGGACCGGTTCTGGAAATTCTGAAGCTGAAGACCTGACCAAAAAGGGAAAGAAAAATAATGGAAGCAGACGATATATGCCTCAAAAATATTCTGTGGCATATGCGTTGTTGATAACTCTTTTCAGGGGAACTTCAAATGGGAATGAGTTTATGCGTAAACAGGAACTTATTGATGCTACTGAAGCTAGTGGGTTGTCTCGAGCGGCAATTGGGCCAGAAAAAGGAAGAGGAAAGCCTGGATTTGGAAGTTCTACGAGGGATTGGTATAGTGGATGGAACTGCATGAAGACACTGATCACAAAGAGTTTAGTTGTAAAATCTAGCTGTCCAGCAAAGTACATGCTAACTGAAGAAGGTAAGGAAGCAGCACGTGAATGTCTCAGACGATCTGGAATGGAAGATTCCCAAGAGAACTCAGTTACTATAGAATGTTCTGATATGGATAAGCAGAACACTTTAGATATGGAACACAGTGATCATGGTCTGGATACTGAAGTGATATCACCACCAACCCAACAAAAAAAGATGAATGTTCCTCTTGATTTCCTAGAGAGGTTTACAAGCATGGGTTACTCCAAGGAACAAGTTGTTAGTGCATTCACTGATGTTTCAAGAAGCCACCCAGACAATGATGTTTCAACTCTGTGGCCGGATGTTTTATGTCATCTTAGAGAGGAGCAAGTATATGGTTTACAGGCGGAATCTCAAACCATGAGAAATAATTTCCACGTGACAAGTTCTATCACTGCCTCAGGCGGTTCCATTGATCTCACTGGAAATGGGAGCAGATCTGTCAGTGCATCTTGTGGGAATATGCCGAGCTTTAGGTCTCCTGATACATCTTTTGCCTTGAGGGCTTGTTCATCATCTGACCATGCCATGCAAAAATCAATTGGAGAGGGGCCTAAATCAATCGTGAACGGTTTAAGTTTACCACCACTGAGCTTGGGGGAGAGGTTTGAAGATGTATATGAAGTGGTTTTAATATTGGATGATCGGGAGCAATTTGCCACTCAGGGATCACGATCTAGGAGAATTATTGAGAATATCCGCAGTCAATTCAAAATCCAAATAGATGTTCGGAGATTGCCTGTTGGAGATGGGATTTGGATAGCTCACCATAAAACTCTTGACAGTGAATATGTGCTGGATTTTATTGTTGAGAGGAAGAATGTTGATGATTTGCGTTCTTCAATCAGGGATAACCGTTATAAGGATCAAAAATTAAGACTTTTGAGGTGTGGACTGAAGAAGCTGATATATCTTGTGGAAGGTGATCCAAATTCCTCTGAAGCTGCTGAAAGCATAAAAACTGCCTGTTTTACAACAGAGATTTTGGAGGGATTTGATGTGCAGAGAACAAGTGGTCTGGCTGATACGCTAAAGAAGTATGGTTATCTTACCCAAGCAATTTCTCAATATTACAAGACAATAGTTCTGGACGACCATGTTAAGTGCTGTGGAACATGCCCTCCTTTTGATGAATTTGTCAAAAGGTGCCAAGATCTTGACAAAATGACAGTCAGTGATGTATTTGCTGTCCAGCTTATGCAGGTCCCTCAGGTTACAGAGGAGGTTGCCCTGGCTGTGCTGGATTTGTACCCCACACTCCTCTCTCTTGCCAATGCCTACTCTCTTCGTGATGGAGATATTTGTGCACAAGAGGACATGCTCAGAAAACAGAGCAATAATGTGATCAATGCAGTTGCCAGTAGGAATATTTTCCAGTTAGTTTGGGGTAGCTGA 1983 0.4221 MEKDARVRCSENEELAAYLFDKWKELAEKPKGISENIEKTLSKAYYNVCNSTTPIQTMKDLSEVKGVGKWILKLMQGFFGTGSGNSEAEDLTKKGKKNNGSRRYMPQKYSVAYALLITLFRGTSNGNEFMRKQELIDATEASGLSRAAIGPEKGRGKPGFGSSTRDWYSGWNCMKTLITKSLVVKSSCPAKYMLTEEGKEAARECLRRSGMEDSQENSVTIECSDMDKQNTLDMEHSDHGLDTEVISPPTQQKKMNVPLDFLERFTSMGYSKEQVVSAFTDVSRSHPDNDVSTLWPDVLCHLREEQVYGLQAESQTMRNNFHVTSSITASGGSIDLTGNGSRSVSASCGNMPSFRSPDTSFALRACSSSDHAMQKSIGEGPKSIVNGLSLPPLSLGERFEDVYEVVLILDDREQFATQGSRSRRIIENIRSQFKIQIDVRRLPVGDGIWIAHHKTLDSEYVLDFIVERKNVDDLRSSIRDNRYKDQKLRLLRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLKKYGYLTQAISQYYKTIVLDDHVKCCGTCPPFDEFVKRCQDLDKMTVSDVFAVQLMQVPQVTEEVALAVLDLYPTLLSLANAYSLRDGDICAQEDMLRKQSNNVINAVASRNIFQLVWGS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0267 660 Gene3D - 96 218 IPR036388 -
Lele11g0267 660 SMART ERCC4_2 406 506 IPR006166 GO:0003677|GO:0004518
Lele11g0267 660 FunFam Crossover junction endonuclease MUS81 96 216 - -
Lele11g0267 660 Pfam ERCC4 domain 410 540 IPR006166 GO:0003677|GO:0004518
Lele11g0267 660 FunFam crossover junction endonuclease MUS81 isoform X1 401 549 - -
Lele11g0267 660 SUPERFAMILY Restriction endonuclease-like 403 549 IPR011335 -
Lele11g0267 660 Gene3D - 400 549 - -
Lele11g0267 660 Gene3D - 585 660 IPR042530 -
Lele11g0267 660 PANTHER CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 3 660 IPR033309 GO:0000737|GO:0006302|GO:0008821
Lele11g0267 660 FunFam Crossover junction endonuclease MUS81 585 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0267 Lele-ChrLele11 2854377 2860773 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0264 09 1860986 1873298 Lele11g0267 11 2854377 2860773 hybridization
Lele10g0258 10 1705327 1709155 Lele11g0267 11 2854377 2860773 hybridization