Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0265 ATGCAGAGGATAGCTACTTACACTCTTGAGAGGCTTGCTTACAGGTTGGTCAAGAATATTCGTGGTGTGCCTGAAGCTCTAAATCTGTCAAGTCCCTTATCAACGTTAGCACAGCAACATGCCAGAACGTTGTTCTTTGAGTTCTGTCCATTCTTGAAGTTCTCTTATATGATTACCAATCAAGCCATTGTTGAAGCCATGAGAGGAGAACGAGTATTCATAATATTATGGATCTCAATGCCTGTGATGCTTCTCAATGGATATATCTTCTTCACTTTGAAAGAAAAATGTCAAGGAAGTCATCAAGTACCTTATGTGAAGATCCCTGGGATTCACGAGAATAAAAGGGTTTTGGAGCAAATGAGGATTCAGTTGATTCAAGAAGTTGAGAAAATGAACATTCGCTTCAACTTCTTTATCATTGAGAGCCAATTGGAGAATCTTTGCTTTGAGAATCTGCCTTTGAAGACAGGAGAGCCCCTTGCCATAAGTTCTGTTCTTCATCTTCATTCTCTTCTTGCAGTTGATGATCAAATCAGTCCTGATTCAATCTTGCCAACGAATCCTTCGCAATTCGATTCGACTAAGATGAGGCAGGTTCTGAGTAGCCTTTGGAAACTCAAACCTAGGTTGATGGTGATTACAGAAGAAGAATCAGATAATAATGGGACTTCATTAACAGAGAGGCTTGATAAGGCAATGAATTTATATGGTACATTGTTTGATTGCTTGGAAGCTAAAGTTCCAAAAGAAAGAGAAATAGAGAGAATAATGGTGGAGAGGATGCTTCTTGGGGAGGAGATAAAGAACATTATTTCTTGTGATGGGATTGATAGAAAAGTAAAAAGGCCATTGCAGAACTATGGGCATGGATTCATGTTACTATCAGACTCCAATAATCAATATTCACCAAAGGAGTACCTCGGAAACATGAAAGTGGAATGCAGGGGCTTCTATCTACCTCGTCTCCTTGGAACGTGTGCTAGGTATACTGAAGTTCGTGACTTTCACAATGCAAGTGAAGCAATCGACAACATTGCTAGTGTTGCCTGTCCTGATGGTGATCCCATGCAGAGAGTAGCAAGCTACTTAAATAAGGGCCTTGCTTACAGGTTAGTGAAGAACATTCGAGGTGTTCCTGAAGCCCTTGATCTTTCAAATCCCTTGCCAAGCTTGGTGCAACAGTATGCAAGAAAGCTGTTCTTTGACTTTTGCCCGTTCTTGAAGTTTTCTTATCTCATCACCAATCAGGCTATTGTTGAAACCATGCAAAGAGAACAAGTGTTTCATATTATGGATCTTAATGCCTGTGATGCTACTCAATGGATGTATCTTATTCGTACTTTGAAGGAACAACACCAGGGAGAGCAACTACCTTTTCTGAAGATTACTGGGATTCATGAGGATAAAGATGTTTTGGAACAAATAGGGTTTCAATTGATTCAAGAAGCTCAGAGAATGAACATACTTTTCCACTTCTATCCCGTTGTAAGCAAATTGGAGAATCTTTGCTTTGAGAAATTGCCTTTGAAGCAAGGAGAGCCCCTTGCTATAAGTTCTGTTCTTCATCTTCATTCACTTCTGGCAGTTGATGATCAAATCAGTCCTGATTCAGTCTTGCCACCTGATCCTTCGGCTTTGCAATGTGTTTCGCCAAAGATGAAGAGGTTTCTAAGTAGCCTTTGGAAACTTCAACCGAGGTTGATGGTCATTACAGAACAAGAATCAGATAACAATGGACCTTCTCTGTCTGATAGGCTTGATAAGGCACTGAACTTCTACGCTGCACTGTTTGATTGCTTGGAGGCTACTGTTCCAAAAGCAAAAGAAGCAGAGAGAATCATGCTTGAAAAGATGCTTTTTGGGGAGGAGATAAAGAACATTGTTGCTTGTGATGGAGTTGACAGAAAAGAGAGGCACGGTAAGTTTCTGAAGACATGGCGACCATCTTTTGAATTGGCGGGCTTCATGAGGGTTCCAATGGACTATGAGAGAATGTTGCAAGTAACAAGGCCATTGCAGAGCTATGGGAATGGATACAAGTTGGTAGACTTCAATCAATGTCTGTTTACATGCTGGAATGATCTCCCACTCTTTTCTATATCAGCCTGGAGATTCTAA 2121 0.4064 MQRIATYTLERLAYRLVKNIRGVPEALNLSSPLSTLAQQHARTLFFEFCPFLKFSYMITNQAIVEAMRGERVFIILWISMPVMLLNGYIFFTLKEKCQGSHQVPYVKIPGIHENKRVLEQMRIQLIQEVEKMNIRFNFFIIESQLENLCFENLPLKTGEPLAISSVLHLHSLLAVDDQISPDSILPTNPSQFDSTKMRQVLSSLWKLKPRLMVITEEESDNNGTSLTERLDKAMNLYGTLFDCLEAKVPKEREIERIMVERMLLGEEIKNIISCDGIDRKVKRPLQNYGHGFMLLSDSNNQYSPKEYLGNMKVECRGFYLPRLLGTCARYTEVRDFHNASEAIDNIASVACPDGDPMQRVASYLNKGLAYRLVKNIRGVPEALDLSNPLPSLVQQYARKLFFDFCPFLKFSYLITNQAIVETMQREQVFHIMDLNACDATQWMYLIRTLKEQHQGEQLPFLKITGIHEDKDVLEQIGFQLIQEAQRMNILFHFYPVVSKLENLCFEKLPLKQGEPLAISSVLHLHSLLAVDDQISPDSVLPPDPSALQCVSPKMKRFLSSLWKLQPRLMVITEQESDNNGPSLSDRLDKALNFYAALFDCLEATVPKAKEAERIMLEKMLFGEEIKNIVACDGVDRKERHGKFLKTWRPSFELAGFMRVPMDYERMLQVTRPLQSYGNGYKLVDFNQCLFTCWNDLPLFSISAWRF 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0265 706 ProSiteProfiles GRAS family profile. 1 283 IPR005202 -
Lele11g0265 706 ProSiteProfiles GRAS family profile. 311 705 IPR005202 -
Lele11g0265 706 Pfam GRAS domain family 322 705 IPR005202 -
Lele11g0265 706 Pfam GRAS domain family 1 280 IPR005202 -
Lele11g0265 706 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 320 700 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0265 Lele-ChrLele11 2836171 2840565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0265 303 705 GRAS Transcription Factor Family AT1G50420 41.834 1.00e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele11g0265 GRAS 1.5e-97 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0262 09 1850994 1853054 Lele11g0265 11 2836171 2840565 hybridization
Lele10g0255 10 1688240 1689445 Lele11g0265 11 2836171 2840565 hybridization