Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0212 ATGGATGCTAAGCGACGAACGGTTCGCTCCTTTTTGTTGAAGCTGAGCTCTGTTTCGGAGCAAACCCAGCTCGATGCTCTTCGCGAGCTTCGCTTGATGACCAAGCAGGAAGAAGAAACCCGACCCGTTATCGCTGATTCGGGTGCGATTCCGTACTTGGTGGATACCCTTTTCTCGCCTTCCCACGTTTTCCAAGACAACGCCTCTGCAACGCTTCTCAACATTTCTATTTCCTGTAGAGAGCCTCTCATGTCCACGCGCGGAGTCCTCGATGCTATCTCGCACGTGCTTTCCCGCCATAACTCGACTTCGTCTCCTTCCGCCGTCCAATCCTGCGCCGCCACGTTGTACAGCCTCCTCGTCGTCGATAACTACAGGCCTATCGTCGGTTCCAAGCGAGACATTGCGTACGCGCTTGTCGATATCATCAAAACCCCCAAATCACCGATGAGATCGATCAAAGACGCCCTCAAGGCTATGTTCGGAATCGCCCTTCATCCTCTTAATCGGGGCACCATGATCCAACTTGGTGCGGTTGAAGCTCTGTTCTCTTTGGTTCTGAAGGACCGGAAGGTCGTCGGGATTGTGGAGGATGCGACGGCGGTGATAGCGCAAATCGCGGGCTGCGAAGAGAGTGTGGAAGCGTTTCGGAAGGTGTCAGGAATCGGTGTGCTGGTTGATTTTCTGGATATGGCGAATATGTCAAGCATGAAGACGAAGGAGAATGCTATTTCTGGATTACTGAAGCTAGTGAGATGTGGAGGGGAGAGAGTAGCCATGGATGTGAGAGTGAGAGCTTTAGGGGCATTTGATGGAATCGCAGACGTTCAAGAGAAAGGTAGCTCCAAAGGGAAGAGCAAGGCGGCGGCATTATCGACGGAATTAATGGGAGATGGAAGCCATGGGATTACACAGAGGGATTCGTGGTTTGATTCATCAACGAGTCAAGATTCATCATTTTCATTCAATTTCTCAACAGATTCATCATAA 990 0.5091 MDAKRRTVRSFLLKLSSVSEQTQLDALRELRLMTKQEEETRPVIADSGAIPYLVDTLFSPSHVFQDNASATLLNISISCREPLMSTRGVLDAISHVLSRHNSTSSPSAVQSCAATLYSLLVVDNYRPIVGSKRDIAYALVDIIKTPKSPMRSIKDALKAMFGIALHPLNRGTMIQLGAVEALFSLVLKDRKVVGIVEDATAVIAQIAGCEESVEAFRKVSGIGVLVDFLDMANMSSMKTKENAISGLLKLVRCGGERVAMDVRVRALGAFDGIADVQEKGSSKGKSKAAALSTELMGDGSHGITQRDSWFDSSTSQDSSFSFNFSTDSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0212 329 MobiDBLite consensus disorder prediction 297 329 - -
Lele11g0212 329 FunFam ARM repeat superfamily protein 2 300 - -
Lele11g0212 329 SUPERFAMILY ARM repeat 12 276 IPR016024 -
Lele11g0212 329 Gene3D - 5 295 IPR011989 -
Lele11g0212 329 MobiDBLite consensus disorder prediction 305 329 - -
Lele11g0212 329 SMART arm_5 209 252 IPR000225 GO:0005515
Lele11g0212 329 SMART arm_5 166 208 IPR000225 GO:0005515
Lele11g0212 329 SMART arm_5 37 77 IPR000225 GO:0005515
Lele11g0212 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 177 221 IPR000225 GO:0005515
Lele11g0212 329 PANTHER U BOX DOMAIN-CONTAINING 8 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0212 Lele-ChrLele11 2492750 2493739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0212 8 291 U-box Gene Family AT2G23140 33.449 6.64e-31 120