Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0211 ATGGAAGACATCAAACCCCAACAATCCACCGTTCTTCATGACCACCCTCCTCCTCCTCCGTCTCCCCCTAATCATCACGATCATATTGATCCCGTCAAAGAAGAATCCCCCAGAAAACCCGTCACCGCCGCCGCCGGCGGAGATAGGTTGAAGAGGGATGAGTGGAGTGAAGGAGCTGTGGCGACGCTTTTGGAGGCGTACGAAGCCAAATGGGTGCTCCGTAACAGAGCCAAGCTCAAGGGCCATGATTGGGAGGACGTCGCCAGGTATGTCTCTTCACGCGCCAACTGTACCAAATCTGCTAAGACCCAAACTCAGTGCAAGAACAAGATCGAGTCGATGAAGAAACGGTACCGTTCGGAATCGGCGTCCGGGGATGCGTCGTCGTCTTGGCCTTTGTATTCGCGGCTTGATCTTCTCCTGCGCGGGACTGGGCCAACTCCGTCCACCACCACGCTCGCTGTGCCGCTTGCGACGGCCGCAGCGGCACCGTCTCAGTTGCCACACTATGAGAATAACCAAGGTTTTGTGTTATTGGAGCCTCCGTTGGCGCTGGCTCAGCTTCCTCATCAACCCCGGCCTCCTGCGGTGGCCGCCGTTGCTCCTCCTCCGCTTGCCAACTCTCAAAACTCTAACGGATCCAACGGTATTGACAAGTTAGCGAAGGAAGATGGATTAGGAACAAACAAGTCGTCAGATCAAGTGTCCAACAAGAACATGAATGAAATTCTGGACACAGATAGCAGCACACCAGCCCTGTACAGCCATTCAAAGGACCACCCAACAAGAAGCAACAACAACAACAAGAGGAAGAAGACGAAGATGGATCATCGAAGCAACTCGAAGAAGATCAAGAGGAAGAGTGGTGGAGAAGGGAAGATGAATGAGATAGGAATAGCAGAGAGCATAAGGTGGCTTGCAGAGGTGGTGCTGAGATCGGAGCAAGCGAGGATGGAGATGATGAAGGAGATAGAGAAGATGAGGGTGGAAGCAGAGGCTAAGAGAGGAGAAATGGATCTCAAAAGAACTGAGATCATTGCTAATACGCAGCTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGATTCACCAGTCTTGGCTGTTTCCAGAGTTTGCATAGAAGGGAAGGGTTTCAGATCTTGGGGCTGATGCAGAGAGTAACTTTGCCATTGCAGCAGGATTATTCTTTAAGACAAGTATCATTTCAGTTAAGCTATTTCATCATAAGTCAGAAGATCATGCATTGCTTTTGCTCTTGTAATGGGTGTCAGGACAGAATTGATGTCCCAACCAATTCATTTGATGTTGTTGGCTTCTCAATGTTAACTTATTTGGTAAGTTTGGTGTTAAAGCTGTCTGAAAGTGATTCAGCGAAGTTTCCAATGGCAGACAATCTAAATTCAAATTCTCTAGTCAAGTTCTCCAGTGCATCAATGGCCGCATTGTTTGACAGAACTGCATTTGGGGGTTCTATTTTGCTGAAATCTTCTGTACTTGGTCTTTCGGGTGAGATTTTATCCTCATTTTAA 1560 0.4814 MEDIKPQQSTVLHDHPPPPPSPPNHHDHIDPVKEESPRKPVTAAAGGDRLKRDEWSEGAVATLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTPSTTTLAVPLATAAAAPSQLPHYENNQGFVLLEPPLALAQLPHQPRPPAVAAVAPPPLANSQNSNGSNGIDKLAKEDGLGTNKSSDQVSNKNMNEILDTDSSTPALYSHSKDHPTRSNNNNKRKKTKMDHRSNSKKIKRKSGGEGKMNEIGIAESIRWLAEVVLRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGFTSLGCFQSLHRREGFQILGLMQRVTLPLQQDYSLRQVSFQLSYFIISQKIMHCFCSCNGCQDRIDVPTNSFDVVGFSMLTYLVSLVLKLSESDSAKFPMADNLNSNSLVKFSSASMAALFDRTAFGGSILLKSSVLGLSGEILSSF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0211 519 MobiDBLite consensus disorder prediction 193 293 - -
Lele11g0211 519 MobiDBLite consensus disorder prediction 1 51 - -
Lele11g0211 519 FunFam Trihelix transcription factor ASIL2 55 120 - -
Lele11g0211 519 MobiDBLite consensus disorder prediction 265 284 - -
Lele11g0211 519 Pfam Myb/SANT-like DNA-binding domain 52 139 IPR044822 -
Lele11g0211 519 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 26 360 IPR044823 -
Lele11g0211 519 MobiDBLite consensus disorder prediction 227 261 - -
Lele11g0211 519 Coils Coil 317 337 - -
Lele11g0211 519 Gene3D - 55 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0211 Lele-ChrLele11 2478461 2484982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0211 19 168 Trihelix Transcription Factor Family AT3G14180 32.335 4.89e-19 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele11g0211 Myb_DNA-bind_4 4.4e-19 CL0123