Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele11g0206 | ATGAAAGTTCCTTGTTGTTCGGTTTGCCAAACGCGGTACAACGAGGAGGAGAGAGTTCCTCTTCTGCTCCAATGCGGCCATGGGTTTTGCAGAGAATGTTTATCGAGAATGTTCTCGGCGTCCATCGATACGACGTTGCCTTGTCCCAAGTGTCGCCATGTGTCTATTGTCGGGAACTCTGTTCAATCTCTTCGCAAGAACTACGCCGTTCTTGCGCTTATACACTCAACTTTGAATGCATCCCGGTCGAATTTTGGCGGTGACTTCACCGACGATGAAGAAGACGGGGACAATGACGATGAGTCCGTCATATTTGGCCGTCATGGATCCCAGACGTCGAGCTCAGGCAGGTGTGGACCTGTGATCGAGGTTGGGGTGCACCGGGAATTAAAATTCCTACGGCGGATAGGTGAGGGGAGGAGGGCCGGAATGGAAACGTGGACGGCGTTGGTCAGTGGAGGCGGTATAAGTGGACAGTGCAGGCACTATGTAGCGGTGAAGAAGGTTGGAATAACAGAGGAGATGAATTTGAATTGGGTGCGTGGACAGCTTGAGAATTTGCGTCGTGCATCGATGTGGTGTAGAAATGTGTGCACGTTTCATGGGGTTATGGAGGTGGACCAGAGTTTGTGTCTTGTGATGGACAGGTGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAATGATGGCAGACTCACTTTGGAGCAAGTCCTAAGGTATGGAGCTGACATTGCACGAGGGGTGGCTGAGCTTCATGCTGCAGGTGTTGTTTGTATGAATCTAAAGCCATCCAATCTTCTTCTTGATGCAAATGGTCATGCAGTGGTTTCTGATTATGGACTTGCCGGAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCAATCAGAGCGTGACCCCTCGAGGATCCATTCATGTATGGAATGTGTAATGCTCAGCCCACATTACACAGCCCCAGAGGTTTGGGAGCCTGTGAAGAAGTCAAATTTATTCAGGGCTGATTCCTTAGGGGTATCCGCAGAGTCAGATGCTTGGAGTTTTGGTTGTGCTTTGGTGGAAATGTGCACGGGTTTTGTTCTTTGGGCTGGTCTAAGTGCGGAGGAAATTTATCAAGCCGTTGTCAAGTCAAGAAAATTGCCTCCACAGTATGCTTGTATCGTTGGTGGTGGAATACCTAGGGAATTGTGGAAGATGATTGGAGAGTGCCTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAGTGCAATGTTGGCTACATTTCTCCATCATTTGCAGGAACTACCATGCAGTCCTGCTGCAAGCCCTGATAAGGATTCTGTTGAATGCTCTGTGTCAAATGTGCTAGAAGCTTCCTCTCAAGCACTTGAATTGAAACTTCCTCAAGATTATGTGAACCATCTTCATCGGCTTGTATCTGAAGGGAATGTTCGGGGTGTTAGACATCTTCTTACAAAGGCCGTCTCAGTAAATGGTAGCAACTATATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGGCAAACTGCTCTCCACCTGGCTTGTAGACGTGGCAGTGCAGAACTTGTTGAGGCTATTTTGGCATGCAAAGAGGCAGATGTTGATGTCTTGGACAAAGATGGAGTTCCTCCACTTGCTTTTGCTTTAGCAGCTGGATCTCCAGAATGTGTTCGTAGTCTTGTCAAAAGAAATGCTAATGTGAGGTCTCGATTAGGAGACGGCTTTGGCCCATCTATTGTTCACATTTGTGCCTATCATGGCCAACCAGAGTGCATGCGAGAACTATTATTGGCTGGAGCTGATGCAAATGCAGTGGATGACCAAGGTGAATCTATATTGCATTGTGCAGTTGCCAAGAGCTATACAGATTGTGCCCTGGTGATACTAGAAAACAGGGGCTGTAGATCAATGGCGACCTTAAATTCAAAGAATCTGACACCATTGCACTTGTGTGTGAAATCATGGAATGTGGCTGTTGTTAAAAAATGGGTGGAAGTTGCCACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAACCCCTTTGGCACTGCATTGTGCATGGCAGCTGCATCTAAGAAAGATCATGCAATTGTGGGGAGGGAACTGGTTCGAATATTGCTTGCTGCAGGTGCTGACCCATCTGCTCAAGATTCACAGTATGGGCGCACAGCTTTGCATACAGCTGTCATATCTAATGATGTTGAGTTGGTTAAAGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGAGCAAAATAGTACACCTCTTCACTTTGCTTTAGCTAGTGGAGCAAAGTTATGTGTTAAATTGCTTCTATCTGCTGGGGCAAATTATAATTTGCAGGATGATGATGGTGACAATGCTTTGCACAAAGCAGCAAAGGCAGCAAAATTGGCACGTGAAAACCTTGACTGGCTTGTTGTGATGCTAAGAAATCCGGATGCTGATGTTCACGTCAGAAACCATAGTGGGAGGACGCTACGTGACATATTGCAGGCCCTTCCCCGGGAATGGATATCTGAGGATCTGATGGAGGCACTCATGTATAGAGGAGTTCATCTAACTCCTACAATGTTTGAAGTAGGAGATTGGGTGAAGTTCAAAAGAACGGTCACAACCCCAACCTATGGGTGGCAAGGTGCTAGCTCGAAGAGTGTTGGCTTTGTGCAAAATGTTCCAAGCAGAGACAATCTCATTGTTTCATTTTGTTCTGGAGACGCTCATGTTTTAGCAAATGAAGTTGTGAAAGTCATTCCATTAGACAGGGGTCAACATGTACAGCTTAAATCAGAGGTTAAAGAACCCAGGTTTGGTTGGCGTGAACAATCACGGGACAGCATAGGCACTGTATTATGCATTGATGATGATGGAATCCTACGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCGGAGATGGAACGAGTTGAGGAATTCAAGGTTGGAGAGTGGGTTCGCATTCGTCCAACTCTTACGTCTACAAAGCATGGGTTAGGATCTGTGACACCAGGAAGCATCGGTATTGTATCTTCTATCAAACCAGACAGTAGCCTGCTGATAGAACTCAGCTATCTTACAACTCCATGGCATTGTGAACCAGAAGAGGTTGAGCATGTTTCTCCTTTCAGGATTGGAGATCGGGTATGTGTGAAACGATCTGTTGCAGAACCTAAATGTGCTTGGGGAGGTGAGACTCATCATAGTGTTGGAAGAATCAGTGAGATTGAGAATGATGGTCTCTTAATAATTGATATACCAAACCGACCAATACCATGGCAAGCTGATCCATCTGATATGGAGAAGCTGGAAGATTTTAAGGTGGTTGGAGATTGGGTCAAAATAAAATCTTCAGTGTCTTCCCCAAAATATGGATGGGAGGATGTTACTAGGAACAGTATTGGGATAATTCATAGCTTGGAGGAAGATGGCGATATGGGTATTGCTTTCTGCTTCAGGAGTAAACCTTTTTCTTGCTCAGTCACTGATGTGGAGAAAGTGCCCCCTTTAGAGGCAGGGCAAGAAATTCATGTGATGCCATCTGTTACTCAGCCTCGACTTGGATGGTCAAATGAATCACCAGCTACCGTTGGAAAAATAGTGACAATTGACATGGATGGTGCTCTCAATGTGAGAGTTACAGGCAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGTAGAACAACTCTCAGGATTTGAAGTTGGTGATTGGGTACATTCAAAACCAAGCGTAGGAACCAGACAAAGTTATGATTGGAATGGTGCTGTGAAGGATGGTATAGCTGTTGTACACAGTATACAGGATTCTGGATACTTGGAATTGGCTAGCTGTTTCCGTAAACAGAGGTACTTCACTCATTATACGGAAGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGCATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGTGCTCAGGCTGAATCTCGAGGTGTTATAACCAGCATTCATGCTGATGGAGAAGTAAGGGTATTATTCTTTGGTTTGCCAGGTTTGTGGAGAGGAGATCCTGCAGACCTCAAGATTGATCAGATGTTTGAAGTGGGGGAGTGGGTAAGGTTGAAAGATAATGCAAATAATTGGAAATCCATCGGACGGGGCAGCATCGGTATCGTACAAGGAATAGGATTTAATGGCGACGAATGGGACGGAAGCACTTGTGTTGGCTTTTGTGGGGAGCAAGAAAGTTGGGTTGGACCAACTTCCCATCTTGAAAGAGTTGACAAACTCTCTGTTGGGCAGAAGGTTAGAGTTAAGCAAACTGTAAAGAATCCAAGATTCGGTTGGGCAGGGCAATCCCATGCTGGTGTCGGAACCATATCAGCAATCGATGCTGACGGAAAGCTTAGAATTTACACTCCACCAGGATCAAAAGCATGGATGTTGGACCCATCAGAAGTAGAATTAGTGGAAGAAGAGGAGGACATACAAATTGGGGACTGGGTGAAGGTTAGAGCATCAGTTTCAACCCCAATCCACCAGTGGGGAGAAGTGGGTCAATTGAGCATTGGGGTGGTACATCGGATGGAAGGCGAGGATCTGTGGGTGTCATTCTGTTTCATGGAGAGATTATGGTTTTGTAAGGCATGGGAAATGGAAAAAGTGAGGCCATTCAAAAATGGGGACAAGGTAAGGATCAGAGATGGAATTGTGAGTCCAAGATGGGGATGGGGAATGGAGACACATGCTAGCAAGGGAGAAGTGGTAGGGGTAGATGCTAATGGAAAACTAAGGATAAAATTCAGGTGGAGGGAAGGGAAGCCATGGGTGGGAGACCCTGCTGATATTGTTCTTGATGACAAGTGA | 4860 | 0.4588 | MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASIDTTLPCPKCRHVSIVGNSVQSLRKNYAVLALIHSTLNASRSNFGGDFTDDEEDGDNDDESVIFGRHGSQTSSSGRCGPVIEVGVHRELKFLRRIGEGRRAGMETWTALVSGGGISGQCRHYVAVKKVGITEEMNLNWVRGQLENLRRASMWCRNVCTFHGVMEVDQSLCLVMDRCYGSVQSEMQRNDGRLTLEQVLRYGADIARGVAELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLAGILKKPSCWKAQSERDPSRIHSCMECVMLSPHYTAPEVWEPVKKSNLFRADSLGVSAESDAWSFGCALVEMCTGFVLWAGLSAEEIYQAVVKSRKLPPQYACIVGGGIPRELWKMIGECLQFKPSKRPSFSAMLATFLHHLQELPCSPAASPDKDSVECSVSNVLEASSQALELKLPQDYVNHLHRLVSEGNVRGVRHLLTKAVSVNGSNYISSLLEAQNADGQTALHLACRRGSAELVEAILACKEADVDVLDKDGVPPLAFALAAGSPECVRSLVKRNANVRSRLGDGFGPSIVHICAYHGQPECMRELLLAGADANAVDDQGESILHCAVAKSYTDCALVILENRGCRSMATLNSKNLTPLHLCVKSWNVAVVKKWVEVATSDEIAEAIDIPNPFGTALCMAAASKKDHAIVGRELVRILLAAGADPSAQDSQYGRTALHTAVISNDVELVKVILAAGVDVNIRNEQNSTPLHFALASGAKLCVKLLLSAGANYNLQDDDGDNALHKAAKAAKLARENLDWLVVMLRNPDADVHVRNHSGRTLRDILQALPREWISEDLMEALMYRGVHLTPTMFEVGDWVKFKRTVTTPTYGWQGASSKSVGFVQNVPSRDNLIVSFCSGDAHVLANEVVKVIPLDRGQHVQLKSEVKEPRFGWREQSRDSIGTVLCIDDDGILRVGFPGASRGWKADPAEMERVEEFKVGEWVRIRPTLTSTKHGLGSVTPGSIGIVSSIKPDSSLLIELSYLTTPWHCEPEEVEHVSPFRIGDRVCVKRSVAEPKCAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKLEDFKVVGDWVKIKSSVSSPKYGWEDVTRNSIGIIHSLEEDGDMGIAFCFRSKPFSCSVTDVEKVPPLEAGQEIHVMPSVTQPRLGWSNESPATVGKIVTIDMDGALNVRVTGRQSLWKVSPGDVEQLSGFEVGDWVHSKPSVGTRQSYDWNGAVKDGIAVVHSIQDSGYLELASCFRKQRYFTHYTEVEKVPCFKVGQHVRFRTGLVEPRWGWRGAQAESRGVITSIHADGEVRVLFFGLPGLWRGDPADLKIDQMFEVGEWVRLKDNANNWKSIGRGSIGIVQGIGFNGDEWDGSTCVGFCGEQESWVGPTSHLERVDKLSVGQKVRVKQTVKNPRFGWAGQSHAGVGTISAIDADGKLRIYTPPGSKAWMLDPSEVELVEEEEDIQIGDWVKVRASVSTPIHQWGEVGQLSIGVVHRMEGEDLWVSFCFMERLWFCKAWEMEKVRPFKNGDKVRIRDGIVSPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGKPWVGDPADIVLDDK | 1619 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele11g0206 | 1619 | Pfam | Protein kinase domain | 161 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat profile. | 752 | 784 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | MobiDBLite | consensus disorder prediction | 85 | 116 | - | - | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat profile. | 719 | 751 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | PRINTS | Ankyrin repeat signature | 505 | 520 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | PRINTS | Ankyrin repeat signature | 768 | 782 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE KEG | 1 | 1618 | IPR044584 | GO:0004842|GO:0006952|GO:0009738|GO:0016567 | |
| Lele11g0206 | 1619 | ProSiteProfiles | Protein kinase domain profile. | 130 | 424 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele11g0206 | 1619 | ProSitePatterns | Zinc finger RING-type signature. | 25 | 34 | IPR017907 | - | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat region circular profile. | 573 | 605 | - | - | |
| Lele11g0206 | 1619 | Gene3D | - | 460 | 667 | IPR036770 | - | |
| Lele11g0206 | 1619 | SUPERFAMILY | Protein kinase-like (PK-like) | 161 | 420 | IPR011009 | - | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat region circular profile. | 752 | 784 | - | - | |
| Lele11g0206 | 1619 | SUPERFAMILY | RING/U-box | 5 | 57 | - | - | |
| Lele11g0206 | 1619 | SMART | ring_2 | 6 | 51 | IPR001841 | - | |
| Lele11g0206 | 1619 | SUPERFAMILY | Ankyrin repeat | 499 | 827 | IPR036770 | - | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat profile. | 573 | 605 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat region circular profile. | 719 | 751 | - | - | |
| Lele11g0206 | 1619 | Pfam | RING-type zinc-finger | 6 | 49 | IPR027370 | - | |
| Lele11g0206 | 1619 | Pfam | Ankyrin repeats (3 copies) | 466 | 566 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | Pfam | Ankyrin repeats (3 copies) | 579 | 659 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | Pfam | Ankyrin repeats (3 copies) | 698 | 783 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 85 | IPR013083 | - | |
| Lele11g0206 | 1619 | Gene3D | - | 668 | 771 | IPR036770 | - | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat profile. | 504 | 537 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | ProSiteProfiles | Zinc finger RING-type profile. | 6 | 52 | IPR001841 | - | |
| Lele11g0206 | 1619 | Gene3D | Transferase(Phosphotransferase) domain 1 | 217 | 459 | - | - | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 752 | 781 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 504 | 534 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 641 | 672 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 461 | 490 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 538 | 567 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 573 | 602 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 679 | 714 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 719 | 748 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 785 | 820 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | SMART | ANK_2a | 606 | 635 | IPR002110 | GO:0005515 | |
| Lele11g0206 | 1619 | ProSiteProfiles | Ankyrin repeat region circular profile. | 504 | 537 | - | - | |
| Lele11g0206 | 1619 | Gene3D | - | 772 | 838 | IPR036770 | - | |
| Lele11g0206 | 1619 | Pfam | Mind bomb SH3 repeat domain | 860 | 978 | IPR040847 | - | |
| Lele11g0206 | 1619 | Pfam | Mind bomb SH3 repeat domain | 1364 | 1485 | IPR040847 | - | |
| Lele11g0206 | 1619 | Pfam | Mind bomb SH3 repeat domain | 1167 | 1231 | IPR040847 | - | |
| Lele11g0206 | 1619 | Pfam | Mind bomb SH3 repeat domain | 1495 | 1613 | IPR040847 | - | |
| Lele11g0206 | 1619 | Pfam | Mind bomb SH3 repeat domain | 1040 | 1104 | IPR040847 | - | |
| Lele11g0206 | 1619 | Pfam | Mind bomb SH3 repeat domain | 1237 | 1358 | IPR040847 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele11g0206 | Lele-ChrLele11 | 2444969 | 2453405 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele11g0206 | 164 | 423 | MAP Kinase Kinase Kinase | AT4G18950 | 26.022 | 5.32e-16 | 80.9 |
Transcription factors information