Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0201 ATGTCGTCTGGCGGTGGAAACGCTGGGGTAGAGTGGCACGTGCGGCCCCCTAACCCGAAGAACCCCGTCGTGTTCTTCGATATCACCATCGGTAACATCCCCGCTGGTAGAATCAAGATGGAGCTCTTCGCCGATATTGCCCCCAAAACTGCTGAGAATTTCAGGCAGTTCTGCACTGGTGAATACAGGAAAGCTGGGCTTCCTGTTGGTTACAAAGGCTGTCAATTTCATAGGGGTGATGGGAGTGGATGTGTTTCCATCTATGGACACAAGTTCGATGATGAAAATTTTATTGCCAAACATACTGGCCCTGGTCTTCTATCAATGGCAAATAGTGGGCAGAATACCAATGGTTGCCAGTTTTTTATAACCTGTGCAAAATGTGACTGGCTAGACAACAAGCATGTCGTTTTTGGGAGGGTGCTTGGAGACGGCCTTTTGGTTGTCAGGAAGATTGAGAATGTGGCCACTGGACCCAATAACCGCCCTAAATTAGCTTGCGTCATTGCTGAGTGTGGCGAAATGTGA 528 0.4867 MSSGGGNAGVEWHVRPPNPKNPVVFFDITIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGQNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0201 175 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 175 - -
Lele11g0201 175 FunFam Peptidyl-prolyl cis-trans isomerase 11 175 - -
Lele11g0201 175 SUPERFAMILY Cyclophilin-like 12 175 IPR029000 -
Lele11g0201 175 PIRSF Peptidylpro_ismrse 13 175 IPR024936 GO:0003755
Lele11g0201 175 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 173 IPR002130 GO:0000413|GO:0003755
Lele11g0201 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 133 148 IPR002130 GO:0000413|GO:0003755
Lele11g0201 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Lele11g0201 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Lele11g0201 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 120 IPR002130 GO:0000413|GO:0003755
Lele11g0201 175 Gene3D - 11 175 IPR029000 -
Lele11g0201 175 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 25 174 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0201 Lele-ChrLele11 2423734 2426599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0201 36 173 U-box Gene Family AT5G67530 38.816 2.28e-21 88.6