Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0197 ATGGCTTCCAGCGTTAACCAAGAACCAGAAGCTTACACAGTTGAAGAAGAAATTGAACAAGAAGAAGATGACGATGGAGAGTCCGAAGGTTGGGATGACTGGAACGGGGATGATGATGAAGGAGGAGAGGGAGGCTCAGGATCGGATTTTCTGTGTCTCTTCTGTGATTCCAAGTACAGTTCGTGCGATTCCTTGTTTGAGCACTGCGCCAAAGTTCACTACTTTGATTTTCATCGCATTAGGAAAGCTCTTAGCTTGGATTTTTATGCCTCTTTCAAGCTCATTAATTACATACGCTCACAGGTAGCGGATAACAAATGTTGGAGCTGTGGATTGACATTCCAGTCCAAAAAAGATTTACAGAATCATTTGCATGACACAGTAAACTTGAAGGATGTTAAGTGTGTATGGGCTGACGAGAGATATCTAAAACCTTTCATACAAGATGATTCGTTGCTGTACAGTTTCGATGAATCTGAAGAAATTGAAGATGATCAGTGTACACCATTTAATGAAGAGGATCTAGTGGGGGATTTGAAGAACTCTGATGAGATTTGTGGTGATGATCAAAATACTGCGGAAAAGACGGTACTTAATGGAACTACTATTTCTGTTAATGATATTGACAGTCCTAGTTCACCAGACAAGGACCTTATTAATGATAAGGACTCAAGAGGGTTTGCTTCATCAAATGACAAGAATCAAGAAGGACATTTGATACCTAACTCTTCAAGTCGTCTTGCAAAGCACATCATGAAGGTCAATGAAAATTATTTTGGAGCTTATAGTTCATTTGGCATACATCGTGAGATGCTGAGTGATAAGGTGAGAATGGATGCATATGGAACAGCTATTTTGAAGAACCCCTCTCTCCTAAAGGGTGCTGTAGTTATGGATGTAGGCTGCGGAACTGGAATCCTTAGTCTATTTGCAGCTCAAGTAGGGGCTTCAAGGGTGATTGCAATTGAGGCTAGTGCCAAGATGGCAGCAGTGGCGTCTAAGGTTGCAAATGATAATGGTCTTTTGCATGGTAAAAACCAAAGTCAAGCTGATGGCCTCCAGAAGGGAGTAATGGAAGTGGTCCAGGGTATGGTTGAAGAGGTTGATAAAAACGTTGAACTTCAACCTCACAGTGTTGATGTATTATTAAGTGAATGGATGGGATATTGCCTGCTGTATGAGTCTATGCTCAGCTCAGTCCTCTATGCACGGGACCGGTGGTTGAAGCCTGGAGGGGCCATTCTTCCTGATACAGCAACCATTTTTGTTGCGGGTTTTGGAAAAGGGGGTACAAGTCTTCCTTTCTGGGAAAACGTGTGTGGTTTTGACATGTCTTGCATTGGCAAGGAGTTGGTGGATAATGCTGCCCGATTTCCAATAGTTGATGTTTTGGACTCTGAAGATTTGGTCACCAAATCTGCGATTCTTCAGACTTTTGACTTGGCAACTATGAAGCCTAATGAAGTGGATTTCACTGCAACCGCTACTTTGGAGCCGATGTTGAACGCTGGCGACACAAAACATTTAGATTCAAAAACAGGATGCCGCTGGTGTTATGGAGTTGTCCTGTGGTTTGAAACTGGATTTACAAGCAGGTTCTGCCGAGAAGCACCAGCCGTGTTGTCGACATCTCCATACACGCCAAAAACACATTGGTCGCAAACCATCTTAACCTTTCGGGAGCCCATTGCTATGGGATCCGAAAAAGCTACTGGAGGTTTAGTGGCAGCAATTGGCACTGATGTTTATCCAGCTGCAAAGATTGATTTGCGCATTAGTATTGTCCGATCGACAGAGCACCGCAGCATTGACATTTCGTTAGAAGCTGTTGGGGTCGGCCCTGATGGTCGAAGATGCAGTTGGCCTGCACAACTCTTTAGTCTGCAGTAG 1890 0.436 MASSVNQEPEAYTVEEEIEQEEDDDGESEGWDDWNGDDDEGGEGGSGSDFLCLFCDSKYSSCDSLFEHCAKVHYFDFHRIRKALSLDFYASFKLINYIRSQVADNKCWSCGLTFQSKKDLQNHLHDTVNLKDVKCVWADERYLKPFIQDDSLLYSFDESEEIEDDQCTPFNEEDLVGDLKNSDEICGDDQNTAEKTVLNGTTISVNDIDSPSSPDKDLINDKDSRGFASSNDKNQEGHLIPNSSSRLAKHIMKVNENYFGAYSSFGIHREMLSDKVRMDAYGTAILKNPSLLKGAVVMDVGCGTGILSLFAAQVGASRVIAIEASAKMAAVASKVANDNGLLHGKNQSQADGLQKGVMEVVQGMVEEVDKNVELQPHSVDVLLSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCGFDMSCIGKELVDNAARFPIVDVLDSEDLVTKSAILQTFDLATMKPNEVDFTATATLEPMLNAGDTKHLDSKTGCRWCYGVVLWFETGFTSRFCREAPAVLSTSPYTPKTHWSQTILTFREPIAMGSEKATGGLVAAIGTDVYPAAKIDLRISIVRSTEHRSIDISLEAVGVGPDGRRCSWPAQLFSLQ 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0197 629 MobiDBLite consensus disorder prediction 12 43 - -
Lele11g0197 629 MobiDBLite consensus disorder prediction 204 242 - -
Lele11g0197 629 MobiDBLite consensus disorder prediction 214 229 - -
Lele11g0197 629 FunFam Protein arginine N-methyltransferase 6 251 416 - -
Lele11g0197 629 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 262 567 IPR029063 -
Lele11g0197 629 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 255 597 IPR025799 GO:0016274|GO:0018216
Lele11g0197 629 ProSitePatterns Zinc finger C2H2 type domain signature. 52 73 IPR013087 -
Lele11g0197 629 Gene3D - 419 617 - -
Lele11g0197 629 CDD AdoMet_MTases 297 415 - -
Lele11g0197 629 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 53 609 IPR025799 GO:0016274|GO:0018216
Lele11g0197 629 SUPERFAMILY beta-beta-alpha zinc fingers 27 161 IPR036236 -
Lele11g0197 629 MobiDBLite consensus disorder prediction 1 43 - -
Lele11g0197 629 Pfam Methyltransferase domain 297 412 IPR041698 -
Lele11g0197 629 Pfam C2H2 type zinc-finger (2 copies) 52 126 IPR041661 -
Lele11g0197 629 Gene3D Vaccinia Virus protein VP39 247 416 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0197 Lele-ChrLele11 2383486 2387107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0197 11 628 C2H2 Transcription Factor Family AT3G12270 55.124 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele11g0197 Methyltransf_25 6.6e-09 CL0063