Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0193 ATGAAGGATCGACCTCTGCATATCAACGACCTTAAGTCAAAGCTATCCCCACCTCCTTTGCTGTCAGCATTTGCGAGATACGGGAGAGTGTTCACTGTCTTTCAAAAAGTCCTAAATCAACAAACATCTCTCTTTTTGGACCGCCATATTAACCAAATAATTCTCTGCTGTTTCCATGGAGTTGCAAAGTTTTCTCAGCTAAGCCTAACTTTTACGAAGATCATTGACAACTATAGAAAGCAACCACAGTGCAAAACAGAAGTTTTCTGCAGTGTACCTATTAACTGGTCATCGGCACACCATAACGGGAGAACAAGACAGGAGTATGTGAATATCATGAAATCTTACAATGAAATATTCATTCCCACTGTACAGCCTCTGTTGGTTGAGCTTGATCCTGGGAGAACAAATAAGAGCAACGGGGTACCTGAATTCAAGACTAATTGTGATGGTCATTTAGTTCAATGTCCTGGATCTCCTAAAGTATCTTCATTTCCAAGCCTTCCTGATATGTCTCCAAAAAAGGTGTCTTCTAGACACAATGTCTACGTCTCACCATTACGATCGTCAAAGATGGATGAACTAATATCACATAGCTCAAAAAGCTACCACGCCTGTGTTGGGGAAAGCACTCATGCATACCAGAGCCCTTAA 654 0.4128 MKDRPLHINDLKSKLSPPPLLSAFARYGRVFTVFQKVLNQQTSLFLDRHINQIILCCFHGVAKFSQLSLTFTKIIDNYRKQPQCKTEVFCSVPINWSSAHHNGRTRQEYVNIMKSYNEIFIPTVQPLLVELDPGRTNKSNGVPEFKTNCDGHLVQCPGSPKVSSFPSLPDMSPKKVSSRHNVYVSPLRSSKMDELISHSSKSYHACVGESTHAYQSP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0193 217 Pfam Retinoblastoma-associated protein B domain 8 125 IPR002719 GO:0005634|GO:0051726
Lele11g0193 217 SUPERFAMILY Cyclin-like 29 143 IPR036915 -
Lele11g0193 217 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 29 216 IPR028309 GO:0006357|GO:0051726
Lele11g0193 217 Gene3D - 6 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0193 Lele-ChrLele11 2364168 2365715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0193 1 217 Core Cell Cycle Gene Families AT3G12280 51.880 2.15e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Lele11g0193 RB_B 7.7e-28 CL0065