Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0163 ATGAATCAGACAAGCATACCAGGATGTGAGGAGAGAAGAGAGGAGTTCAAGAACAATATTTGTGGAGGGTGCCAGAACAAGAGGCCTAGAACAGGAGGGCGTAAGAGGGAATTCACATATGCAGAGCTGTATGCAGCAACAGAAGGGTTTTCAATGAAGAACTTCCTATCAGAAGGAGGGTATGGTAAAGTGTACAAAGGGGAGCTTCATGGGATGAAGATTGCTGTGAAGCAACATAGAAATGATAATGGAAGCCACAGGCAAGCAGGGGACAAGGAGTTCAAGTCCGAGGTTGATGCTCTCGGCAGAGTGAGACATGAGAATGTTGTTGTCATGTTGGGATCTTGCTCTGAAGGGAATCATAGGATCCTTGTCTATGAATTTGTCTGCAACGGTTCACTCAACCAGCATTTACACCAACACTGTAGGAGACCTCTGAGTTGGGAGAACAGAATCAAGGTAGCAATTGGAGCAGCAAGAGGATTGCTATATCTGCATGACAACAACATTATTCACAGAGACATGACACCTAACAACATCCTTCTTACTCATGACTTTGAAACCTTGCTGGGAGATTTTGGGCTGGCAATTACAAGTGAAGAGAATGAAGACACATCATCATCGGAAGAATGTGTAGGAGGAGATGAGGATTATGTGGCACCAGAATATGCAGAAGATGGGAAATTATCAACAAAAACAGATGTTTACTCTTTTGGGGTGGTTCTCTTGCAGCTCATTACAGGCATAAGAACTACTGATAGAAGAAGACTTGGAGGAAGAGGAAGCCTTGTGGAATGGGCAAGGCCACTATTGAGAGAGAAGAAATGTGGGAGTGTGATAGATAAGAGGATAGTGGAAGATCATGATTGCCATCAGTTATATTGGATGAGTCGTCTTGCTCAGTCTTGTCTCTCCAAAGATCCTCACAAGCGTTTGACTATGGCCAAGGTGGTGGAAGCTTTAAGTCACATTGCAGAGGGATGTGGATGCAATGATAAGGTGAAGAAGTGTGGTTACTCATACCACACAGATGTATCATCCCTTCTCATCTCTGCTTCTTCTACGACTCAAACTCAAGGGTGA 1083 0.4404 MNQTSIPGCEERREEFKNNICGGCQNKRPRTGGRKREFTYAELYAATEGFSMKNFLSEGGYGKVYKGELHGMKIAVKQHRNDNGSHRQAGDKEFKSEVDALGRVRHENVVVMLGSCSEGNHRILVYEFVCNGSLNQHLHQHCRRPLSWENRIKVAIGAARGLLYLHDNNIIHRDMTPNNILLTHDFETLLGDFGLAITSEENEDTSSSEECVGGDEDYVAPEYAEDGKLSTKTDVYSFGVVLLQLITGIRTTDRRRLGGRGSLVEWARPLLREKKCGSVIDKRIVEDHDCHQLYWMSRLAQSCLSKDPHKRLTMAKVVEALSHIAEGCGCNDKVKKCGYSYHTDVSSLLISASSTTQTQG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0163 360 FunFam Proline-rich receptor-like protein kinase PERK8 11 128 - -
Lele11g0163 360 Gene3D Phosphorylase Kinase; domain 1 24 128 - -
Lele11g0163 360 PANTHER OS01G0253100 PROTEIN 25 325 IPR045271 -
Lele11g0163 360 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 129 336 - -
Lele11g0163 360 ProSitePatterns Tyrosine protein kinases specific active-site signature. 170 182 IPR008266 GO:0004672|GO:0006468
Lele11g0163 360 ProSiteProfiles Protein kinase domain profile. 50 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0163 360 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
Lele11g0163 360 PIRSF ILK 20 340 - -
Lele11g0163 360 Pfam Protein tyrosine and serine/threonine kinase 52 321 IPR001245 GO:0004672|GO:0006468
Lele11g0163 360 Gene3D Transferase(Phosphotransferase) domain 1 129 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0163 Lele-ChrLele11 2181670 2184302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0163 38 336 Trihelix Transcription Factor Family AT5G38560 42.997 3.21e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele11g0163 PK_Tyr_Ser-Thr 3.2e-47 CL0016