Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0145 ATGTCTACCTATGGCAAGCTAGATGAATCTGAGCAAGAAAAGCTCGTGGCTCGCCGGAAAACCCGGAGGCGAATCGCCATCATGAGCTTGTCAGCTGTTGTCCTGGTCGGCGTTGTTGTGGCGGCGGTCTTAGGAACAAGTCTTGCTCACAGCAATGACAACAACAACAGCACTAGTAGCAATAATGTCGATGTTTCGGCTTCGGTGAAAGCTGTGTGTGATGTGACATTGTACAAGGATGCTTGTTATGGCAGCCTGGGACGTGAGGTTCAACAAGGACAGCTGATTAAGCCTGAGGATTTGTTCAGGCTGTCTCTTCAAGTTGCATTGAATGAAGTTTCTGATGCAGCTGATAAGTATTTCTCTGGTGAAAAGGGAGGTTTTGGGGATTTGATTGGTGATGATAATAGAACCATGGAAGCTTTCAGTAATTGCAAGGAGCTCTTGGATCTTGCTATTGATCATATCAATATCTCATTGTCTTCTGGCCAGAATATTTCTTCTGTTCTTGAGATTTTTGAAGATCTTCAAACATGGTTGAGTGCTTCAGGTACCATTCTTAATTCCATCACTTCTGATAGTGCTGAAACATACCAACAAACATGCATAGATGGCTTAGAGGAATCAAAAGAATCAGTAAAGAACAGAGTTACAAGCTACCTCAAGAACTCTACAGAATTCACCAGCAACAGTCTCGCCATTATCACTTGGATTAAGCAAGCTGCAAGCACACTAAACTTGAAACGACGACGCTTATTGAGCCTACCAGCATGGCTTCATGAGAAAGACAGAAAGCTGCTTGCATCATCAGAGAAGGACTTGAAGAAGAAAGCAGACATTGTTGTGGCAAAAGATGGTTCTGGAAAATACAGAACAATCTCTGAAGCACTCAAGCATGTCACTGAAAAGAGCAAGAAGAGAACTGTGATCTATGTGAAGAAAGGAGTTTACTTTGAGAATGTTAGAGTTGAGAAGAAAAAATGGAATGTCATGATGATTGGTGATGGAATGAACGCAACAATTGTGTCTGGTCGTCTCAACTTTGTCGATGGCACTCCCACTTTCTCATCTGCAACATTTGCTGTTTTTGGGAAGAACTTCATGGCGAGGGACATGGGATTTCGCAACACTGCAGGGCCAGAGAAGCACCAAGCAGTGGCGCTGATGACAAGTGCCGATCAGGTTGTGTACTACAGATGCCACATTGATGCATTTCAAGACACTCTCTATGCTCATGCACATCGTCAGTTCTATAGAGAATGCAATATCTATGGCACTGTTGATTTCATCTTTGGCAACTCTGCTGTTGTCATTCAAAACTCCAACATCTTCCCAAAGGTACCTATGCTGGGCCAGAAGAACACGATCACAGCACAAGGGAAGATAGACCCAAATATGAACACAGGGATTTCAATTCAGAATTGCAAGATCTCACCCTTTGGCAACTTGAGTTCTGTGCAAACATATCTCGGAAGGCCATGGAAGAACTACTCAACCACTGTGTTCATGCAAGCTTCAATGGGAAACGTAATTGATCCTAGGGGCTGGTTGCCATGGGTAGGAGACTCAGCACCAGACACCATTTTCTATGTTGAGGTTCAGAACTTTGGACCTGGTGCTTCCACAAAAGCTAGGGTCAAATGGAAGGGCTTAAGAACAATTTCTGCTAAACAAGCAAATAGATTCACAGTCAAGGCCTTTCTTCAAGGAGACCGATGGATTCCAGCCACAAGCACCCCTTACAAATCTTCTCTGTGA 1758 0.4374 MSTYGKLDESEQEKLVARRKTRRRIAIMSLSAVVLVGVVVAAVLGTSLAHSNDNNNSTSSNNVDVSASVKAVCDVTLYKDACYGSLGREVQQGQLIKPEDLFRLSLQVALNEVSDAADKYFSGEKGGFGDLIGDDNRTMEAFSNCKELLDLAIDHINISLSSGQNISSVLEIFEDLQTWLSASGTILNSITSDSAETYQQTCIDGLEESKESVKNRVTSYLKNSTEFTSNSLAIITWIKQAASTLNLKRRRLLSLPAWLHEKDRKLLASSEKDLKKKADIVVAKDGSGKYRTISEALKHVTEKSKKRTVIYVKKGVYFENVRVEKKKWNVMMIGDGMNATIVSGRLNFVDGTPTFSSATFAVFGKNFMARDMGFRNTAGPEKHQAVALMTSADQVVYYRCHIDAFQDTLYAHAHRQFYRECNIYGTVDFIFGNSAVVIQNSNIFPKVPMLGQKNTITAQGKIDPNMNTGISIQNCKISPFGNLSSVQTYLGRPWKNYSTTVFMQASMGNVIDPRGWLPWVGDSAPDTIFYVEVQNFGPGASTKARVKWKGLRTISAKQANRFTVKAFLQGDRWIPATSTPYKSSL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0145 585 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Lele11g0145 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 239 IPR035513 -
Lele11g0145 585 FunFam Pectinesterase 65 239 - -
Lele11g0145 585 Coils Coil 203 223 - -
Lele11g0145 585 SUPERFAMILY Pectin lyase-like 277 581 IPR011050 -
Lele11g0145 585 Pfam Plant invertase/pectin methylesterase inhibitor 68 234 IPR006501 GO:0004857
Lele11g0145 585 SMART PMEI_2 64 234 IPR006501 GO:0004857
Lele11g0145 585 FunFam Pectinesterase 273 585 - -
Lele11g0145 585 PANTHER PECTINESTERASE 36 577 - -
Lele11g0145 585 Pfam Pectinesterase 279 571 IPR000070 GO:0030599|GO:0042545
Lele11g0145 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 238 IPR035513 -
Lele11g0145 585 Gene3D - 274 585 IPR012334 -
Lele11g0145 585 CDD PMEI-like_3 71 238 - -
Lele11g0145 585 TIGRFAM PME_inhib: pectinesterase inhibitor domain 28 238 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0145 Lele-ChrLele11 2030027 2032928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0145 2 585 Carbohydrate Esterase AT3G10710 57.385 0.0 667