Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0144 ATGTCCCCATCCTCCAATCTTCCTCTTCTCTTCTTTTTCTTCCTCTTTCTTCCATTAATCCTCCCAGCCCAACCTCCTCCACCACAGTCTCCCTCTTCTCTCTGCAAGTTCACATTGTACCCTAAACTATGCCGTTCCATGCTCTCTGTCATCTCCTCCTCCCACTCCCCCTCCGACCCCTACAATGCCGGCAAGTTCTCCGTCAAACAGAGCCTCAAGCAAGCCAAGAAACTCCTCAAGGTCTTCGACGACTTCCTCCGCAGCCGCCGCCATTCTCAATCCTCCCCGGAGGTTCGCGCCCTCGACGACTGCCGTGACCTCAGCCTCCTCAATCTCGAATACTTGGAAGCCGTCGCCGCCGACCTCCAAACAGCCCCAACAGCCTCCGCCGAGCTGACAGACAAGGTCGAGAGCTACCTTAGCGCAGTGGCGACCAACCACTACACGTGCTACGACGGGCTTGTGGCGGTGAACAGTAACATTGGGAAGGTACTGGCGGTGGCGTTGAGGAATGTGACGGAGGTGTATAGTGTATCGTTAGGGTTGGTGAGTGAGGCGTTGAATCAGAATTTGAAGAATAAGTTCAAGACTCGCGAGCATGGACTTCCATCTCAGTCTTACAAAGTCAGGCAGCCTCTTGAGAAGCTCATCCAGGTTCTTCATCAGAAGTACAGTTGCAAGGCAGCATCAAACTGCACAACCAGAAGTGAGAGGATTATTCACAGGGAAAGTGAAGGGAAAGGGATTCTATTAAACGGTTATGCAATAGTGAGCCATTATGGGACTGATAACTTCACTTCCATTGGAGAAGCCATTGCTGCTGCACCTACAAACCTGAAACCCGAAGATGGCTACTTCCTTATCTATGTCAGAGAAGGATACTATGAAGAATATGTGGTTGTTCCTAAACACAAGAAGAATATCTTGCTCATTGGTGATGGTATCAACCAGACCATCATCACTGGCAATCACAGTGTCATTGATGGCTGGACAACCTTCAATTCTTCCACCTTTGCCGTTTCTGGAGAAAGATTCATAGCAGTGGATATCACATTCAGGAACACAGCAGGTCCAGAGAAGCACCAGGCAGTAGCAGTGAGGAACAACGCAGATCTCTCGACCTTTTATCGATGCAGCTTCGAAGGATACCAAGACACTCTCTATGCTCACTCCCTTAGGCAATTCTACAGAGAGTGTGAGATTTATGGCACATTAGACTTCATATTCGGCAATGCAGCTGTTGTATTCCAAGGCTGCAAGATGTATGCCAGGAAGCCACTTCCATTCCAGAAGAATGCCATCACAGCACAAGGCAGAACCGATCCGAACCAGAACACGGGAATCTCAATCCAGAATTGCACCATTGAAGCAGCACAGGATTTAGCTTCAGATTTGAACTCTACTGCTAGTAATACGACTGTCTTGACCTACTTGGGAAGGCCATGGAAGTTATATTCTAGAACTGTGTACATGGAGTCTTATATTGGGGATGTGATTCAACCTTCTGGTTGGTTAGAGTGGAATGAGACTGTAGGGTTGGACACTTTGTTTTATGGTGAGTTCAATAATTATGGACCTAGGGCTAATACTAGCAATAGGGTTCAATGGCCTGGTTTTAATCTTCTGAATGCTACTCAGGCTTTGAACTTTACTGTCCTCAATTTTACACTGGGAGATACATGGCTTCCTGATACAGATATACCATACTCTGCAGGATTACTAGAACATTAG 1731 0.4749 MSPSSNLPLLFFFFLFLPLILPAQPPPPQSPSSLCKFTLYPKLCRSMLSVISSSHSPSDPYNAGKFSVKQSLKQAKKLLKVFDDFLRSRRHSQSSPEVRALDDCRDLSLLNLEYLEAVAADLQTAPTASAELTDKVESYLSAVATNHYTCYDGLVAVNSNIGKVLAVALRNVTEVYSVSLGLVSEALNQNLKNKFKTREHGLPSQSYKVRQPLEKLIQVLHQKYSCKAASNCTTRSERIIHRESEGKGILLNGYAIVSHYGTDNFTSIGEAIAAAPTNLKPEDGYFLIYVREGYYEEYVVVPKHKKNILLIGDGINQTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTLDFIFGNAAVVFQGCKMYARKPLPFQKNAITAQGRTDPNQNTGISIQNCTIEAAQDLASDLNSTASNTTVLTYLGRPWKLYSRTVYMESYIGDVIQPSGWLEWNETVGLDTLFYGEFNNYGPRANTSNRVQWPGFNLLNATQALNFTVLNFTLGDTWLPDTDIPYSAGLLEH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0144 576 Gene3D - 254 575 IPR012334 -
Lele11g0144 576 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Lele11g0144 576 PANTHER PECTINESTERASE 20 563 - -
Lele11g0144 576 CDD PMEI-like_3 35 185 - -
Lele11g0144 576 FunFam Pectinesterase 250 573 - -
Lele11g0144 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 186 IPR035513 -
Lele11g0144 576 SUPERFAMILY Pectin lyase-like 253 572 IPR011050 -
Lele11g0144 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 183 IPR006501 GO:0004857
Lele11g0144 576 Pfam Plant invertase/pectin methylesterase inhibitor 32 181 IPR006501 GO:0004857
Lele11g0144 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 184 IPR035513 -
Lele11g0144 576 Pfam Pectinesterase 255 558 IPR000070 GO:0030599|GO:0042545
Lele11g0144 576 SMART PMEI_2 26 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0144 Lele-ChrLele11 2025669 2029605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0144 35 574 Carbohydrate Esterase AT3G10720 59.007 0.0 667