Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0138 ATGGCTTCTTCAAGCCCTAACAAGGGAACTGATAAGTACGAATCATCACTTTCAACTCTTCCACCAACCATCCGTCCACGAGTAGAATCAGAAAAAGCTTATTTGCCAATGAAGAAAACATCAGATAAAAAACTCTTGCCGATCGACAGGCAGGGTTTTGGATCCAAGGGACAAAAGATTCAACTTCTCACTAACCATTTTAAAGTTAGCCTGAGCAAGAAAGATGGTTTCTTCTATCACTACACTGTTGCTCTGTTTTATGAAGATGGACGCCCTGTGGAAGCTAAGGGTATTGGGAGAAGAGTCATAGACAAAGTTTATGAGACTTATGCTTCTGAGCTGCAAACCAAGAACTTTGCATACGATGGAGAGAAAGCCTTATTCACTATTACTTCACTCCCACGTAACAAGCTCGAATTCGTCGTCGTACTCGATGAAATTTCATCAAACAAGGTTGGAAGGAATGGGAATGGAAGCCCTGAGAACAACGCGGAGGGAACTGATAAGAAGAGAATGAGACGTCCATATCAATCCAAGACATTCAAGGTGGAGATAAGTTATGCTAAAGAAGTGCCTTTGCAAGAAATTGTGGATGCATTGAGCGGTAAAGAATCTGATCACCAAGAAGCATTTATGGTTCTGGACATCATATTAAGGCAGCATGCAGCCAAGCAGGGATGTCTACTTGTGCGTCAATCATTCTTCCATGACAGAGTAGAAAATTACAGAGACATTGGAGGTGGTGTTCAAGGTTGTCGTGGCTTTCATTCAAGTTTCCGAGCCACTAAAGGGGGTTTGTCCCTAAACGTTGACGTGTCAACAACGTTGCTCCTAAAGCCTGGTCCAGTGTTGGACTTCCTCTGCATGAATCAAGATGTTAAACACCCCAGTATGATTGATTGGACCAAGGCAAAAAGGATGTTGAAAAACCTGCGAATCAAGGCGAATAATATGGAGTACAAAATCACCGGATTGAGTGATAAGCTCTGCAAAGATCAAACATTTTCCTTCAAGCAAGGAAGAGAGACAAATGGGGAAGTGAACTCAATTGAAATAACAGTTCGTGAATATTTTGAAGGCCATAAAGGCATCAGATTGCGTGATTCAGCTAATTTACCATGCATCAACGTTGGCAAACCAAAGAAACCCTCTTATTTTCCAATAGAGCTCTGTACTTTGGTTTCATTGCAACGCTACACAAAGGCACTAACCAGTTTGCAAAGAGCTTCAGTTGTGGAAGTGTCAAGGCAAAAGCCCCATGAACGAATGGCATCTCTGTCAAATTCACTAAGGAACAGCAGATATAATGATGAACCTATGCTTCGTTCTTCTGGAATTACCATTGATTCTGACTTCACAAAAGTTGAAGGTCGTGTTCTACCAGCTCCAAAACTTAAGGTCGGGAAGGAGGAGGAAATCTTTCCCAGAAATGGGAGGTGGAATTTCAACAATAAGCAACTTTTTCAACCAATGGTGATTGAGCGTTGGGCAATAGTCAACTTCTCAGCTCGTTGCAATATTATTTTCCTTGTCGAAGGCCTGCGGAAATGTGCACATTTGAAGGGGATGACCTTGAAAGAGCCATTTAGAGTGTTTAAAGAGGATGAACGAATGAGTCGTCAGCCCCCCATTGCTAGGGTTGAGGAATTGTATGCACGTGTGATGAAGCAGTTGCCTGGGTTACCCCAACTTCTGTTGTGCATTCTACCAGAGAAGAAGAATTCTGATCTTTATGGCCCTTGGAAAAGAATAAATCTTGCAGTGGATGGGAAAGGGGGAGGGGTTGTTACTCAATGTATTGCCCCAACAAAAATGAATGATCAGTATTTTACCAATGTTTTATTGAAGATTAATGCCAAGCTTGGTGGGATGAATTCCTTTTTGGCAATAGAGCGTTCACTTTCTATACCTAGAGTTTCAAAGGTGCCCACCTTAATTCTCGGAATGGATGTCTCACATGGCTCTCCTGGTCGATCAGATGTGCCATCTATTGCTGCGCTGCTTGATGACTTCATTGATACTTCGGGAAGGAGGCCTGAACAGATTGTCGTATTCAGGGATGGAGTCAGTGAGTCACAATTTAATCAAGTGCTGAATATTGAGTTGGACCAAATTATTCAGGCATGCAAGTTTTCTCAAGAAAGTTGGGATCCAAAGTTTACTGTGATTATTGCCCAAAAAAATCACCACACCAAGTTCTTTCAGGCCAATGCTCAAGAAAATGTTCCACCAGGAACTATCGTTGATAATAGAATCTGTCACCCGAAGAACAACGATTTTTACATGTGTGCTCATGCTGGGATGATTGGAACAAGTCGGCCCACTCATTACCATGTACTACACGATGAGATTGGCTTCACGGCTGATGATTTGCAACAACTCGTGCATTCTCTTTGTTATGTGTATCAGAGGAGCACAACAGCTATATCAGTAGTTGCCCCAATCTGTTATGCTCACTTAGCAGCAGCACAAGTGGCCCAGTTTATCAAGTTTGATGAATTCTCAGAGTCGTCGTCTTCTTCTAGCCATGGTGGACTCACTTCTGTTGGTGCCCCTCAAGTGCAGGAGTTACCTCGTCTTCATGACCGAGTCCGCAACTCCATGTTCTTCTGTTAG 2616 0.427 MASSSPNKGTDKYESSLSTLPPTIRPRVESEKAYLPMKKTSDKKLLPIDRQGFGSKGQKIQLLTNHFKVSLSKKDGFFYHYTVALFYEDGRPVEAKGIGRRVIDKVYETYASELQTKNFAYDGEKALFTITSLPRNKLEFVVVLDEISSNKVGRNGNGSPENNAEGTDKKRMRRPYQSKTFKVEISYAKEVPLQEIVDALSGKESDHQEAFMVLDIILRQHAAKQGCLLVRQSFFHDRVENYRDIGGGVQGCRGFHSSFRATKGGLSLNVDVSTTLLLKPGPVLDFLCMNQDVKHPSMIDWTKAKRMLKNLRIKANNMEYKITGLSDKLCKDQTFSFKQGRETNGEVNSIEITVREYFEGHKGIRLRDSANLPCINVGKPKKPSYFPIELCTLVSLQRYTKALTSLQRASVVEVSRQKPHERMASLSNSLRNSRYNDEPMLRSSGITIDSDFTKVEGRVLPAPKLKVGKEEEIFPRNGRWNFNNKQLFQPMVIERWAIVNFSARCNIIFLVEGLRKCAHLKGMTLKEPFRVFKEDERMSRQPPIARVEELYARVMKQLPGLPQLLLCILPEKKNSDLYGPWKRINLAVDGKGGGVVTQCIAPTKMNDQYFTNVLLKINAKLGGMNSFLAIERSLSIPRVSKVPTLILGMDVSHGSPGRSDVPSIAALLDDFIDTSGRRPEQIVVFRDGVSESQFNQVLNIELDQIIQACKFSQESWDPKFTVIIAQKNHHTKFFQANAQENVPPGTIVDNRICHPKNNDFYMCAHAGMIGTSRPTHYHVLHDEIGFTADDLQQLVHSLCYVYQRSTTAISVVAPICYAHLAAAQVAQFIKFDEFSESSSSSSHGGLTSVGAPQVQELPRLHDRVRNSMFFC 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0138 871 SUPERFAMILY Ribonuclease H-like 562 828 IPR012337 -
Lele11g0138 871 Coils Coil 308 328 - -
Lele11g0138 871 CDD Piwi_ago-like 439 829 IPR045246 -
Lele11g0138 871 MobiDBLite consensus disorder prediction 1 23 - -
Lele11g0138 871 CDD PAZ_argonaute_like 280 394 - -
Lele11g0138 871 SMART DUF1785_2 228 280 IPR014811 -
Lele11g0138 871 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 47 666 - -
Lele11g0138 871 ProSiteProfiles Piwi domain profile. 564 658 IPR003165 GO:0003676
Lele11g0138 871 MobiDBLite consensus disorder prediction 152 173 - -
Lele11g0138 871 SMART Piwi_a_2 564 830 IPR003165 GO:0003676
Lele11g0138 871 Pfam Argonaute linker 2 domain 421 466 IPR032472 -
Lele11g0138 871 Pfam Piwi domain 665 830 IPR003165 GO:0003676
Lele11g0138 871 Pfam N-terminal domain of argonaute 58 218 IPR032474 -
Lele11g0138 871 Gene3D paz domain 274 399 - -
Lele11g0138 871 Gene3D - 459 629 - -
Lele11g0138 871 ProSiteProfiles PAZ domain profile. 320 395 IPR003100 GO:0005515
Lele11g0138 871 ProSiteProfiles Piwi domain profile. 664 830 IPR003165 GO:0003676
Lele11g0138 871 Gene3D - 665 871 IPR036397 GO:0003676
Lele11g0138 871 SUPERFAMILY PAZ domain 275 436 IPR036085 GO:0005515
Lele11g0138 871 Pfam Argonaute linker 1 domain 230 276 IPR014811 -
Lele11g0138 871 MobiDBLite consensus disorder prediction 1 26 - -
Lele11g0138 871 Pfam PAZ domain 284 411 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0138 Lele-ChrLele11 1987983 1993399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0138 50 871 Eukaryotic Initiation Factors Gene Family AT5G43810 33.224 9.07e-145 451