Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0134 ATGGGGATGGAATCCAGAAAGCTCTCAGATGAATATGAAGTTTCGGAGATCTTAGGAAGAGGGGGTTTTTCTGTTGTCAGAAAAGGCATTAAAAAATCAGGCAGTGAAAAAGCCTATGTAGCCATAAAAACACTCCGAAGAGTAGGTACCTTTGAAACTTTTGGATTTCCAAAAACCCAGAAAGGTAATAATAATAAAAGCATAGATTCCATGGGGTTCCCGAAAACATGGAGACAAGTTTCAATATCAGATGCTTTACTCACCAATGAGATCTTGGTCATGAGGAAGATAGTAGAGAACGTTTCACCTCATCCAAATTTGATTGACCTCTATGATGTCTACGAGGATTCAAATGGAGTTCATCTCGTTCTCGAGCTTTGTTCCGGCGGCGAACTGTTTGATCGGATTGTGGCTCAAGAGAAGCACTCAGAGGCAGAAGCTGCAGCAGTAATTCATCAGATACCAAAAGGATTAGATGCAATTCACAGAGCTAATATTGTTCACAGGGACTTGAAGCCTGAGAATTGCTTGTTCCTGGACAGTAGAAAGGATTCTCCTCTGAAGATCATGGACTTTGGGTTGAGTTTTGTGGAGGAATTTAGTGACCCAGTTGTTGGCTTGTTTGGATCCATTGATTATGTTTCACCAGAAGCACTTTTTCAAGGAAAGATTACTAACAAGAGTGACATGTGGTCTGTTGGAGTGATTCTTTATATCTTGCTCTCTGGGTATCCGCCTTTCATTGCTCAGAATAATCGCCAAAAGCAACAAATGATCATGACTCTTCTCACTCATCCTTGGGTCAGAGGAGAAATAGCTAAAGGTGATCAGATGGATCCTGAGATTGTTGACAGATTGCAAAAATTCAATGCTCGTCGCAAACTCCGCGCTGCTGCAATTGCTAGTTTATGGAGCAGCACAGTCTTCTTGAGAATCAAAAACTTGAAATCCTTGTTGGGATCCTATGATCTTACACAGGACGAAATTGAAAATCTCAAGATACACTTCAAGAAAATTTGTGCAGATGGAGACAATGCTACTCTCCCTGAATTTGAGGAGGTGTTAAAAGCAATGAATATGTCATCACTTATTCCTCTGGCAACGCGCATATTTGACATATTTGACAACACTCAAGATGGAACCGTTGACATGCCTGATCGGATTTGCCTCTTGTTTCTTGGACAACAGATGTATGACACAGATCGATCTGGGTTCATTACTAAGGAAGAAGTAGCATCTATGCTCACAGCTTTACCAGAGGACTGCCTGCCGGCTGACATCTTCGAACCAGGGAAATTAGACGAGATATTTGACCTCATGGATGCCAACGGTGATGGAAAAGTCATATTTAAAGAATTCAAAGCCGCTATGCAGAGAGACAGCTCTCTGCAGGACGTAGTCCTTTCTTCTCTCCGACCATCATAG 1425 0.4182 MGMESRKLSDEYEVSEILGRGGFSVVRKGIKKSGSEKAYVAIKTLRRVGTFETFGFPKTQKGNNNKSIDSMGFPKTWRQVSISDALLTNEILVMRKIVENVSPHPNLIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQEKHSEAEAAAVIHQIPKGLDAIHRANIVHRDLKPENCLFLDSRKDSPLKIMDFGLSFVEEFSDPVVGLFGSIDYVSPEALFQGKITNKSDMWSVGVILYILLSGYPPFIAQNNRQKQQMIMTLLTHPWVRGEIAKGDQMDPEIVDRLQKFNARRKLRAAAIASLWSSTVFLRIKNLKSLLGSYDLTQDEIENLKIHFKKICADGDNATLPEFEEVLKAMNMSSLIPLATRIFDIFDNTQDGTVDMPDRICLLFLGQQMYDTDRSGFITKEEVASMLTALPEDCLPADIFEPGKLDEIFDLMDANGDGKVIFKEFKAAMQRDSSLQDVVLSSLRPS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0134 474 Gene3D - 395 469 - -
Lele11g0134 474 ProSiteProfiles EF-hand calcium-binding domain profile. 396 421 IPR002048 GO:0005509
Lele11g0134 474 SMART serkin_6 12 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0134 474 Gene3D - 308 394 - -
Lele11g0134 474 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 3 128 - -
Lele11g0134 474 SUPERFAMILY EF-hand 316 465 IPR011992 -
Lele11g0134 474 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Lele11g0134 474 Pfam Protein kinase domain 95 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0134 474 CDD EFh 397 458 IPR002048 GO:0005509
Lele11g0134 474 ProSitePatterns EF-hand calcium-binding domain. 399 411 IPR018247 -
Lele11g0134 474 Gene3D Phosphorylase Kinase; domain 1 2 128 - -
Lele11g0134 474 ProSiteProfiles Protein kinase domain profile. 12 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0134 474 ProSitePatterns Protein kinases ATP-binding region signature. 18 43 IPR017441 GO:0005524
Lele11g0134 474 Gene3D - 280 307 - -
Lele11g0134 474 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 253 - -
Lele11g0134 474 Gene3D Transferase(Phosphotransferase) domain 1 129 275 - -
Lele11g0134 474 SMART efh_1 396 418 IPR002048 GO:0005509
Lele11g0134 474 SMART efh_1 432 460 IPR002048 GO:0005509
Lele11g0134 474 SUPERFAMILY Protein kinase-like (PK-like) 7 289 IPR011009 -
Lele11g0134 474 Pfam EF-hand domain pair 396 458 IPR002048 GO:0005509
Lele11g0134 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0134 Lele-ChrLele11 1965687 1968625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0134 86 461 EF-hand Containing Proteins AT3G10660 31.640 1.98e-52 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Lele11g0134 Pkinase 1.7e-44 CL0016