LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele11g0133	ATGGCAGATGTAATGAACATTCCTTCCGATTCTCTCGACAAATCCCCTTCCTCGGCTTCGCCATCTGCTCCTCCGGCTGCGGAACCAGCGCCTTCTGCCACTGCAGCTGGGGATGACGACCTGCCTGCGCCTCCGCCAACCTCGTCAGCACAGTTGCATCCCCCTCCGCAAGCGGTGTCCCGGAGAAGGGATAGGGATTCTAGGGATAGGAGGGATGATAGGGATTATGATCGACATCCGAATCGACGTGGGGGTGATTTCTATGACAGGAATATGTCGCCCCCACCGCCTCCGAGAGACAGAGATAGGGACTTCAAACGCCGTCGCAGCCCCAGCCCGTATCGTGACCGACGATATTCTCCTCGGCGCTCACCTCCAAACTATAAGCGATCCAGAAGGGGGAGTCCCCGCGGCGGCTATGGACCTGATGACAGATTTGGCTATGATTATTTTGGTGGCTATGAACGTGGAATAGGTGGAAGACCTGGTTATGCAGATGAGAGGCCTTATGGCAGATTTGGCTACCGATCTGTGCCAGGGTATCAAAATGGGATTTCAGACATGGAATCAAATCGTGGTTTTGCAGATTTGCCAAGTGGCAGTGCACAAAGGGAGGGTTTGATGTCTTATAAGCAATTCATTCAGGAGCTTGAGGATGATATATTGCCAGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCCGAGTACATTACTACACAGAAACGGGCTTATTTCAATGCTCATAAGGATGAGGAATGGTTGAAAGATAAATATCATCCCATGAATTTACTAACAGTGATCGACAGGAGGAATGAAAATGCCCGAAGGCTGGCCAAGGATTTTTTGCTTGATTTGCAGAGTGGAACACTAGATCTAAATCCTGGTCTGAATGCCACTTCAGCCAGCAAATCAGGTCAAGCAAGTGAACCCAATTCAGAGGATGAAGCAGACAGCGGTGGTAAACGAAGAAGACATGGCAGGGGACCTAATAAAGATAATGATTTTGCAGCTGCTCCCAAGGCTCATCCAATCAGTTCTGAACCTAGACGAATACAAGTGGATATTGAACAGGCTCAGGCCCTTGTACGCAAGCTTGATGCAGAAAAGGGAATTGAAGATAATATTTTATCCACCAGTGATCACAATAGAAGTGATGATAAGGGTCACAGTGGATCTGTTGGACCCATAATCATCATACGGGGCCTGACATCTGTCAAGGGCTTAGAAGGCATTGAACTTCTGGACACACTGCTTACATATCTTTGGCAGATTCATGGCGTTGATTATTATGGCATGATTGAGACTAATGAGGCTAAGGGTTTTAGGCATGTGAGGCCAGAAGGAGGACATGATGATACAAATAAATCTGGGTCTGGGTCTGAATGGGAAAAGAAAGTTGACTCATTTTGGCAGCAAAGGTTGAATGGTCAGGATCCATTGGAGATGATGACTGCTAAGGAGAAGATAGATGCTGCGGCAGTTGAAGTGTTGGATCCACATGTTAGAAAAATTAGAGATGAAAAGTATGGGTGGAAGTATGGTTGTGGGGCTAAGGGTTGCACAAAGCTTTTCCATGCTGCTGAATTTGTGCACAAACATCTTAAGCTTAAACACCCAGACCTTGTGATGGAATTAACTTCAAAAGTTCGTGAGGATCTCTATTTTCAGAACTACATGAATGATCCAAATGCTCCTGGTGGAGCACCTGTCATCCAGCAAGCTCAGAAGGACAAACCGCTAAAGCGTAGGCTAGGCCTGGAAGGTCGATTAAGAGATGATCGTGGCAATCGAAGAGACCATGATCGGAGTGACAGAATAAATGAAGGAGATATATCTGAGAACTCCCCATCTCGTGATCGGCAGCCTAAAGCTCTTGACATGGGAAACCATGATGAAGCAATGTATGATGCATACTCAGGATCCGGTGTTCCTCCATTTACCACAGACATGCCCCCTCCTCCACCAGTCTTGATGCCTGTACCTGGGGCAGGACCTTTAGGACCTTTCGTTCCTGCTCCCCCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGACCGTCATCATATGATAATCCTGGAAGAAAGATGCGATCTGGTCCTCACATAGGTGGGGGTGGACCTGCTCCGATAATTGCTGTTCCCCCAGCTTTTAGACCAGATCCTCGGCAGATGCGTAGTTATCAAGATCTAGATGCCCCAGAGGATGAAGTGACCGTGATAGATTATCGGAGTTTATAG	2241	0.4743	MADVMNIPSDSLDKSPSSASPSAPPAAEPAPSATAAGDDDLPAPPPTSSAQLHPPPQAVSRRRDRDSRDRRDDRDYDRHPNRRGGDFYDRNMSPPPPPRDRDRDFKRRRSPSPYRDRRYSPRRSPPNYKRSRRGSPRGGYGPDDRFGYDYFGGYERGIGGRPGYADERPYGRFGYRSVPGYQNGISDMESNRGFADLPSGSAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYITTQKRAYFNAHKDEEWLKDKYHPMNLLTVIDRRNENARRLAKDFLLDLQSGTLDLNPGLNATSASKSGQASEPNSEDEADSGGKRRRHGRGPNKDNDFAAAPKAHPISSEPRRIQVDIEQAQALVRKLDAEKGIEDNILSTSDHNRSDDKGHSGSVGPIIIIRGLTSVKGLEGIELLDTLLTYLWQIHGVDYYGMIETNEAKGFRHVRPEGGHDDTNKSGSGSEWEKKVDSFWQQRLNGQDPLEMMTAKEKIDAAAVEVLDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPDLVMELTSKVREDLYFQNYMNDPNAPGGAPVIQQAQKDKPLKRRLGLEGRLRDDRGNRRDHDRSDRINEGDISENSPSRDRQPKALDMGNHDEAMYDAYSGSGVPPFTTDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGPSSYDNPGRKMRSGPHIGGGGPAPIIAVPPAFRPDPRQMRSYQDLDAPEDEVTVIDYRSL	746

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	315	332	-	-
	Lele11g0133	746	Pfam	Arsenite-resistance protein 2	458	643	IPR007042	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	444	464	-	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	683	733	-	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	1	146	-	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	565	657	-	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	295	314	-	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	95	123	-	-
	Lele11g0133	746	PANTHER	ARSENITE-RESISTANCE PROTEIN 2	59	744	IPR039727	GO:0006397
	Lele11g0133	746	ProSitePatterns	Zinc finger C2H2 type domain signature.	516	539	IPR013087	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	295	352	-	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	58	86	-	-
	Lele11g0133	746	Pfam	SERRATE/Ars2, N-terminal domain	211	292	IPR021933	-
	Lele11g0133	746	MobiDBLite	consensus disorder prediction	577	631	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele11g0133	Lele-ChrLele11	1957861	1963094	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele11g0133	80	746	C2H2 Transcription Factor Family	AT2G27100	64.099	0.0	771