Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0131 ATGAAGAGGTCTTGCGGTGCTTCGTCTTCCACTTGCTCTTCTTCGTCTCCTTCTTCTTCTTCTTCTTCTTCTCTCGAGTTTCAGAATCCCGATCAGACGGAAGGGCGAGGCAGAGCGAGTAATAAGCGTGCCAGAAGGAGTCGTAATGGCAATGCAAATGGTAATGACGGTGGTAATAATGACGATAATAAGTCGAAGAAGGTGAAACCCGAAAGCTCGAGTTCTTCCGCCAGTAATGGCGGACGAAGAAGTTCTGTTTACAGAGGAGTCACCAGGCATCGATGGACTGGGAGGTTTGAAGCTCATCTCTGGGATAAGAGTTGCTGGAACAATCTCCAGAACAAGAAGGGACGACAAGGGGCTTATGACAATGAAGAAGCCGCTGCTAGAACCTATGATCTTGCTGCTCTTAAATACTGGGGAAGAGATTCAACATTGAATTTCCAGATAGAAATATATACAAAGGAGCTTGAGGAAATGGAGAAGGTCACAAAAGAAGAGTACTTAGCTTCATTGCGACGGCAAAGCAGTGGATTTTCTAGAGGGGTTTCTAAGTATCGAGGGGTAGCTAGGCATCACCATAATGGTCGATGGGAAGCTCGGATCGGAAGAGTACTGGGCAACAAATATCTCTACTTGGGAACATATGGTACTCAAGAGGAAGCAGCTACAGCATACGACTTGGCAGCTATACAATACAGAGGCGCGAATGCAGTGACCAATTTCGATATTAGCAGATACATCGACAAGATCAACCTCATCAACCAGAACAACAATGTCGAATCCCAAGAAGATCAAACTGTAATCACAATACCATCGCATGTAGAAGAAGAAGTAGAAGATGAAGATGTAGAAGCAGCACCTCCTAATTCATCTTCCGAGTTGGACTCCGAGTGGGAAAATCTGCAGAACCAGGCGCAACCACCACAACAGCAACTACAAAATCTAGAAATCGAACTTGAAAATCCTCAAATTCAAACTAATCAGATCTCTCCACCAAACGAAGAATCCTCTCCGATTGCTCCTGTGGACCCTACTACTACGACCACCACCGATGAACAGGAGCTTGCATGGATCTTCATGGATGACGACGGATTCTCTCATTTTCAAGTTCCAGATATGCCTGACGGCGACTTACTGAGCGTGTTCTGTGATGGCGTAGGAAGATTCGACGACGACGACATTGGATTTCTCTTCAGGCCAGATCCTGAGGAGGCCGATTTCAACCTGGACGCGATTTTGAGCAGTCCGAGCTGCTACGGAGATCTGGCGACGGGGGATTCAACGAGGATGGTGACGGGTGATGATGATTGTGGTGGGCAAGAGAAGTTGCTCTGTTCTGCAAATTCTGCTTCTTGTTCACCAAACTCTTTGATTTCTTATTCGGATTATACTTCATGA 1401 0.4611 MKRSCGASSSTCSSSSPSSSSSSSLEFQNPDQTEGRGRASNKRARRSRNGNANGNDGGNNDDNKSKKVKPESSSSSASNGGRRSSVYRGVTRHRWTGRFEAHLWDKSCWNNLQNKKGRQGAYDNEEAAARTYDLAALKYWGRDSTLNFQIEIYTKELEEMEKVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYGTQEEAATAYDLAAIQYRGANAVTNFDISRYIDKINLINQNNNVESQEDQTVITIPSHVEEEVEDEDVEAAPPNSSSELDSEWENLQNQAQPPQQQLQNLEIELENPQIQTNQISPPNEESSPIAPVDPTTTTTTDEQELAWIFMDDDGFSHFQVPDMPDGDLLSVFCDGVGRFDDDDIGFLFRPDPEEADFNLDAILSSPSCYGDLATGDSTRMVTGDDDCGGQEKLLCSANSASCSPNSLISYSDYTS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0131 466 MobiDBLite consensus disorder prediction 276 311 - -
Lele11g0131 466 MobiDBLite consensus disorder prediction 1 35 - -
Lele11g0131 466 MobiDBLite consensus disorder prediction 70 85 - -
Lele11g0131 466 Pfam AP2 domain 85 141 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 Pfam AP2 domain 184 235 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 SUPERFAMILY DNA-binding domain 85 151 IPR016177 GO:0003677
Lele11g0131 466 ProSiteProfiles AP2/ERF domain profile. 185 243 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 CDD AP2 85 150 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 MobiDBLite consensus disorder prediction 290 311 - -
Lele11g0131 466 SUPERFAMILY DNA-binding domain 184 245 IPR016177 GO:0003677
Lele11g0131 466 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 26 311 - -
Lele11g0131 466 Gene3D AP2/ERF domain 184 245 IPR036955 GO:0003700|GO:0006355
Lele11g0131 466 Gene3D AP2/ERF domain 86 151 IPR036955 GO:0003700|GO:0006355
Lele11g0131 466 FunFam AP2-like ethylene-responsive transcription factor 184 245 - -
Lele11g0131 466 SMART rav1_2 86 155 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 SMART rav1_2 185 249 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 MobiDBLite consensus disorder prediction 327 350 - -
Lele11g0131 466 CDD AP2 184 245 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 MobiDBLite consensus disorder prediction 1 85 - -
Lele11g0131 466 FunFam AP2-like ethylene-responsive transcription factor 85 151 - -
Lele11g0131 466 PRINTS Ethylene responsive element binding protein signature 225 245 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Lele11g0131 466 ProSiteProfiles AP2/ERF domain profile. 86 149 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0131 Lele-ChrLele11 1942567 1948127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0131 81 323 AP2-EREBP Transcription Factor Family AT5G57390 52.015 5.32e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele11g0131 AP2 1e-08 CL0081