Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0130 ATGCATGTTCTTATTCCTCCTATATCTTTCACGCGCTGGATAGAGCCTATTTTGCATTCATATTTTCTCCGCATGTTCTGTAGTTTTGGTGATTTGAAGTTCTGGATTCACTTTCTCCCTGCTTTCTCCGATCTAGCTGAATCAAAGTCAAACACTGGAATGGACTCGAGCAATGAAGCTGGAAACTCCTTACATTTCGACCCAGCTTTGAAATCATCGTCTCGAAGAAGCATCACCTCGAGTCACTCTAGGGGATCCGACAGGATTTCTGTTCAGGAAGTGACGTTCAATCATTCAGGATCCAAGCCTGTTCGTTACGGGTCAAAAGGCGCTGATTCAGAATTATTCAGCGTGTCGCAGAAGGAAATCAACGACGAGGATGCGAGATTGGTTTATATAAACGATCCTCTGAGGACAAACGAGAGGTTCGAATTCGCAGGAAATTCTATTCGCACTGGGAAATACTCCATCCTCACGTTTTTGCCCAGGAATTTGTTCGAACAATTTCATAGAGTTGCTTATATTTATTTCCTTGTAATTGCCGTTCTTAATCAGCTTCCTCAGCTCGCCGTTTTTGGTAGAGGAGTTTCCGTTTTGCCTTTAGCATTTGTTCTACTCGTTACAGCTGTGAAGGATGCGTTTGAGGATTGGAGGAGACATCGATCAGATAAAGTCGAGAACAGCAGATTAGCGTCAGTTTTAGTTGGTGATCAATTTGAAAAGAAGAAATGGAAGGATATTAGAGTTGGTGAAATTGTTAAGATTCATGCAAATGAAACAATCCCTTGTGATATTGTGTTGCTATCAACCAGTGATCCAACTGGGGTTGCATATGTGCAGACTATAAATTTAGATGGAGAATCAAATTTGAAGACTCGATATGCAAAGCAAGAGACACTTTCAATAGTTCCTGAAACAGACAGAATCAATGGTTTGATTAAGTGTGAAAAACCCAATAGGAACATATATGGGTTTCAGGGTAATATGGAAGTAGATCATAAGCGTTTGTCACTTGGATCCTCCAATATTGTTCTTAGAGGCTGTGAGCTCAAGAATACTAAATGGGCACACGGTGTTGCTGTATATTGTGGCAGTGAGACCAAAGTTGTGCTCAACAGCTCAGGAGCTCCATCGAAGAGGAGCCGGCTCGAGACTCGGATGAACTCCGAGATAATCATTCTCTCTTTCTTTCTTGTTGCTTTGTGTACAATCACCTCTGTTTGTGCTGCTGTTTGGTTGAAGCGCCACGAGGATAAGTTGGATATTTTGCCTTATTATAGGAAGTGGAACTTCTCAGAGGACAAGAAATATAAGTATTATGGATGGGGATTGGAAATTGTTTTCACATTCCTCATGTCTGTTATAGTGTTCCAGGTCATGATTCCCATATCATTGTACATTTCCATGGAGCTTGTCCGTGTTGGCCAGGCTTACTTCATGATCCGAGACAACAGAATGTATGATGAGGCTTCAAATTCCAGATTTCAGTGCAGGGCTTTAAATATCAATGAAGATTTAGGGCAAATCAAGTATGTTTTCTCAGACAAAACTGGCACACTTACTGAGAACAAGATGGAGTTTCAATTTGCCAGCATCTGGGGCGTGGATTACAGTAAGACAAATGAAAGTCAGGAGAATGAGCAAGTTGAATACCGTGCTGAAGTGGATGGAGTAGTGTTGAGGCCAAAGATGAAGGTGAAAGTAAATCCAGAACTTTTGCAGTTATCAAGAAGTAGACTTGAAAACAAAAAAGGAAAAAGAATTCATGACTTCTTCCTAGCATTGGCAGCCTGCAATACCATTGTTCCTCTTCATGTTGACACATCTGATCCTAAAGTCAAGTTGATAGATTATCAAGGGGAGTCACCAGATGAACAAGCACTGGCATATGCGGCTGCCGCCTATGGTTATATGCTTATAGAACGGACCTCAGGTCACATAATTATTGATATTCAGGGAGTGAGACGAAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGATCGGAAGAGAATGTCAGCCATATTGGGGTATCCTGACGATTCGGTGAAACTTTTGGTCAAGGGTGCTGATACATCCATGTTAAGTGTAATAGATAAGTCATCAAACATGGACATAATACATGCAACTGAAAGCCATCTTCACTCTTACTCTTCTCTGGGGTTAAGGACTCTTGTCATTGGAATGAGGGAACTGAATACTTCAGAATTCGAGCAATGGCACCGAGCCTTTGAGACCGCGAGCACTGCTTTGATGGGTCGGGCTGCTTTACTTCGTACGGTTGCTAGCAATATCGAAAACAACCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAATTGCAGAAAGGGGTGCCAGAATCCATCGAGTCTCTGAGGACTGCAGGTATTCAGGTATGGGTGTTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCCTCAAAGCTCCTAACAAGTGAAATGGCTCAGATTATAATTAATAGCAAAAATAAAGAGTCCTGTAGAAGGAAATTACAAGATGGCCTTGTCATGTTCCAAAAGCTCATGGCTTCTTCCGGTGTTGCCAATGGTACTGAAACTTCATATGCTCCTAAAATTCCAATAGCCTTGATCATTGATGGTACCAGCCTCGTACATGTTCTTGATAGTGAACTCGAAGAACAGCTCTTTCAACTAGCAAGCCAATGTTCGGTGGTTCTCTGTTGTCGCGTGGCTCCTTTGCAAAAGGCTGGAATAGTTGCCCTTGTGAAAAAGAGGACTTCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTAGGCATCAGTGGACAGGAAGGTCGGCAAGCTGTCATGGCATCTGATTTTGCGATGGGGCAGTTTCGGTTTTTAGTTCCCCTCTTGTTGGTGCATGGGCACTGGAATTACCAACGTGTGGGTTATATGATACTATACAATTTTTATAGAAACGCCGTCCTTGTTATGGTCTTATTTTGGTATGTGCTGTTCACCGCCTTCACGTTGACGACAGCTATAAATGAATGGAGCAGCATGTTGTACTCAATCATTTACACTTCATTGCCAACAATAGTTGTTGGTATTCTTGACAAAGACCTTAGTAAAAGGACTCTTATAAACCATCCTCAGCTCTATGGGGCCGGACAGAGACACGAGGCATACAACAAAAAATTATTTTGGTTTACAATGGTTGATACATTGTGGCAAAGCATTGTCGTCTTCTTCGGCCCTTTCTTCGCATATTGGGGAAGCACTATCGATGTAGCAAGCATTGGAGATCTTTGGACTCTTGCAGTTGTTATTTTAGTTAACATACACTTGGCCATGGATGTCATCAGGTGGAATTGGATTACTCATGCTTCCATTTGGGGTTCTATAGTTGCAACTTTCATCTCCGTCATGGTCATTGATGCTATCCCTACATTTCCTGGCTACTGGGCCATCTTTCATGCGTTAGGAACGGGATCCTTTTGGCTATGTCTGCTTGGAATCATAATCACAGCATTGCTCCCTCGTTTCGTGGTGAAGTATATTCATCAATATTACTTCCCTGATGATATCCAGATTTCAAGAGAAATTGAGAAGGTTGGAACTTCAAGGGTGGTTGGTGGCCGGGATATAGAAATGCATCCCATTCCAGTTGGTCCACCAAGATGA 3699 0.4225 MHVLIPPISFTRWIEPILHSYFLRMFCSFGDLKFWIHFLPAFSDLAESKSNTGMDSSNEAGNSLHFDPALKSSSRRSITSSHSRGSDRISVQEVTFNHSGSKPVRYGSKGADSELFSVSQKEINDEDARLVYINDPLRTNERFEFAGNSIRTGKYSILTFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSVLPLAFVLLVTAVKDAFEDWRRHRSDKVENSRLASVLVGDQFEKKKWKDIRVGEIVKIHANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSIVPETDRINGLIKCEKPNRNIYGFQGNMEVDHKRLSLGSSNIVLRGCELKNTKWAHGVAVYCGSETKVVLNSSGAPSKRSRLETRMNSEIIILSFFLVALCTITSVCAAVWLKRHEDKLDILPYYRKWNFSEDKKYKYYGWGLEIVFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIRDNRMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQFASIWGVDYSKTNESQENEQVEYRAEVDGVVLRPKMKVKVNPELLQLSRSRLENKKGKRIHDFFLALAACNTIVPLHVDTSDPKVKLIDYQGESPDEQALAYAAAAYGYMLIERTSGHIIIDIQGVRRRFNVLGLHEFDSDRKRMSAILGYPDDSVKLLVKGADTSMLSVIDKSSNMDIIHATESHLHSYSSLGLRTLVIGMRELNTSEFEQWHRAFETASTALMGRAALLRTVASNIENNLCILGASAIEDKLQKGVPESIESLRTAGIQVWVLTGDKQETAISIGYSSKLLTSEMAQIIINSKNKESCRRKLQDGLVMFQKLMASSGVANGTETSYAPKIPIALIIDGTSLVHVLDSELEEQLFQLASQCSVVLCCRVAPLQKAGIVALVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRVGYMILYNFYRNAVLVMVLFWYVLFTAFTLTTAINEWSSMLYSIIYTSLPTIVVGILDKDLSKRTLINHPQLYGAGQRHEAYNKKLFWFTMVDTLWQSIVVFFGPFFAYWGSTIDVASIGDLWTLAVVILVNIHLAMDVIRWNWITHASIWGSIVATFISVMVIDAIPTFPGYWAIFHALGTGSFWLCLLGIIITALLPRFVVKYIHQYYFPDDIQISREIEKVGTSRVVGGRDIEMHPIPVGPPR 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0130 1232 Pfam E1-E2 ATPase 231 471 - -
Lele11g0130 1232 Pfam Cation transport ATPase (P-type) 621 697 - -
Lele11g0130 1232 SFLD p-type atpase 497 982 IPR044492 -
Lele11g0130 1232 Pfam Phospholipid-translocating P-type ATPase C-terminal 959 1198 IPR032630 -
Lele11g0130 1232 SUPERFAMILY HAD-like 500 972 IPR036412 -
Lele11g0130 1232 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 902 1017 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele11g0130 1232 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 145 1205 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele11g0130 1232 SUPERFAMILY Calcium ATPase, transduction domain A 228 369 IPR008250 -
Lele11g0130 1232 SUPERFAMILY Calcium ATPase, transmembrane domain M 145 1198 IPR023298 -
Lele11g0130 1232 Gene3D - 769 971 IPR023214 -
Lele11g0130 1232 ProSitePatterns E1-E2 ATPases phosphorylation site. 515 521 IPR018303 -
Lele11g0130 1232 CDD P-type_ATPase_APLT_Dnf-like 147 1091 - -
Lele11g0130 1232 Gene3D - 617 751 IPR023299 GO:0000166
Lele11g0130 1232 PRINTS P-type cation-transporting ATPase superfamily signature 513 527 - -
Lele11g0130 1232 PRINTS P-type cation-transporting ATPase superfamily signature 931 950 - -
Lele11g0130 1232 FunFam Phospholipid-transporting ATPase 769 971 - -
Lele11g0130 1232 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 786 IPR023299 GO:0000166
Lele11g0130 1232 FunFam Phospholipid-transporting ATPase 203 372 - -
Lele11g0130 1232 FunFam Phospholipid-transporting ATPase 617 750 - -
Lele11g0130 1232 Pfam Phospholipid-translocating ATPase N-terminal 131 195 IPR032631 -
Lele11g0130 1232 MobiDBLite consensus disorder prediction 50 88 - -
Lele11g0130 1232 Gene3D - 203 371 - -
Lele11g0130 1232 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 120 1209 - -
Lele11g0130 1232 SFLD C1.7: P-type atpase like 497 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0130 Lele-ChrLele11 1929896 1935126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0130 54 1232 Primary Pumps ATPases AT5G04930 69.205 0.0 1714