Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0129 ATGTCAACCGTGAGAGATCCTGCTATAAAGCTATTTGGTAGAGATATTCCTGTAGATTCAACACGCAACACCGATTCGGCTCAAGTTATGGACTTTCAACTTGATTCTTATGTCATTTTTTTGCATATGCTATCAGTTTCTGGATTACTAATCATGAAATGGGCTTATAACAGGTATGATAAATCAACAATTGAAGGAAATGTTTCTTTCAGAGCTGGCAAGCAGCAGAATCCTATTGAAGAAGCAGATGGAAACGTTTATGGAAGTCCTACTGTTGAAGTGGAGGCTAAAGTAGTTCATAGAACTAAGGACTACAAGGCTGGTAATAGAGATATGGATCATCAAGAAAAAGTTTTCAAGAAACCAGATAAGGTGCTGCCTTGTCCTCGCTGCAACAGCTTGGAGACTAAGTTTTGCTATTTCAATAATTACAATGTTAATCAACCAAGGCATTTCTGCAAAAATTGCCAAAGATATTGGACAGCTGGCGGGATAATTAGAAATGTTCCCGTGGGGGCCGGAAAGCGCAAAAATAAACATTCGCCATTACCTGTTGGCTCTGACATAGCATCTGTTGCCCACACGGACTCTAACTCTATTCCTACTGGAGGAATGGGAAATAGCCCTAGAATTGGGGAGGAAGCTCCTCTTTGTGAATCCTTGGAAACTGTGTTAAATCTAAAAGGCCAGAAGAAAACTGAAGTTGACTCCTCCATTGGTGATGATAGTGAGGAGCCTTCCAGGGATTTTGAATCCAGGGAAAAGGAATGCTCAGCAAATGAAATTGAGCAGGTAGGTTTGCAACAACACTTGAATGGTTTTAATCCTCTACATCCACTTCATTATTATACTGTACCTCCCTGGGCTTACCAATGGAACCCATGTTGGAATTCAATGGTATTTAGACCCAGTCCTGCTTACATGGGATCTGCAACCATGATGGCAGTCCCAGGTTTCACTGCACCAACAGTAGAATTATCGGCAGTACCTCTTTATTCGAGTCCCCTGCCAAGCTGGACTGGCCAGAAGGAAGAATCTCCATTTGCTGGGTCTACATTTAGTGGCATCCCATCACCTTCCTCTTCCACTAGCAGCAGTGTTTGTTCTGGGACTAAGTTTCGAACCTTAGGAAAACATTCCAGAGATGTAAGTACTCAGGCAGGTGATGCAATGAGACAGAATCTTTGGGTACCTAAGACGCTGAGAATTAATAATCCGGAAGAAGCTGCAAGGAGTTCTATATGGTCTGCTTTTGGTACAAAGTTTGAACAGAACAAACCGATTATCAAAGGCAGCGTTTTTAAATCTTTTGAACCTAAGTCGGAAGGTGCAAGTTCTCATATTTCAAATACTGATCAAATTCTGAGTGCAAACCCTGCTGCTTTTTGTCGCTCAGAATCATTTCAGGAAAGAATGTAA 1419 0.4165 MSTVRDPAIKLFGRDIPVDSTRNTDSAQVMDFQLDSYVIFLHMLSVSGLLIMKWAYNRYDKSTIEGNVSFRAGKQQNPIEEADGNVYGSPTVEVEAKVVHRTKDYKAGNRDMDHQEKVFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGIIRNVPVGAGKRKNKHSPLPVGSDIASVAHTDSNSIPTGGMGNSPRIGEEAPLCESLETVLNLKGQKKTEVDSSIGDDSEEPSRDFESREKECSANEIEQVGLQQHLNGFNPLHPLHYYTVPPWAYQWNPCWNSMVFRPSPAYMGSATMMAVPGFTAPTVELSAVPLYSSPLPSWTGQKEESPFAGSTFSGIPSPSSSTSSSVCSGTKFRTLGKHSRDVSTQAGDAMRQNLWVPKTLRINNPEEAARSSIWSAFGTKFEQNKPIIKGSVFKSFEPKSEGASSHISNTDQILSANPAAFCRSESFQERM 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0129 472 MobiDBLite consensus disorder prediction 229 255 - -
Lele11g0129 472 MobiDBLite consensus disorder prediction 191 205 - -
Lele11g0129 472 ProSitePatterns Zinc finger Dof-type signature. 128 164 IPR003851 GO:0003677|GO:0006355
Lele11g0129 472 ProSiteProfiles Zinc finger Dof-type profile. 126 180 IPR003851 GO:0003677|GO:0006355
Lele11g0129 472 MobiDBLite consensus disorder prediction 234 255 - -
Lele11g0129 472 MobiDBLite consensus disorder prediction 343 367 - -
Lele11g0129 472 Pfam Dof domain, zinc finger 123 180 IPR003851 GO:0003677|GO:0006355
Lele11g0129 472 MobiDBLite consensus disorder prediction 173 212 - -
Lele11g0129 472 PANTHER CYCLIC DOF FACTOR 2 4 471 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0129 Lele-ChrLele11 1924452 1926871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0129 4 470 C2C2-Dof Transcription Factor Family AT5G39660 33.204 8.46e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele11g0129 zf-Dof 1.1e-31 No_clan