Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0119 ATGGCGGGAGGTAAAATCAAGAAGGAGAAAGGCAAGCCAAAGCAGCAACACACGCCGTACCAAGGAGGTATATCGTTTCACAAATCGAAGGGTCAACATATCCTCAAGAACCCTTTGCTGGTCGATTCCATAGTCCATAAATCCGGCATCAAAAGCACCGATGTCATCCTTGAGATCGGTCCTGGTACTGGAAATCTTACGAAGAAGCTATTGGAAGCTGGAAAGATGGTAATTGCTGTTGAGATTGACCCTCGTATGGTTCTCGAGCTTCAAAGACGATTCCAGGGTACCCCTTACTCCAGCCGCCTTAAGGTTATTCATGGTGACGTGCTTAAGACTGAACTTCCCTATTTTGACATATGTGTGGCAAATATTCCATATCAAATATCTTCGCCGCTCACGTTCAAGTTGCTCAACCACCAACCTGCATTTAGGTGTGCAATTATTATGTTTCAGAGAGAATTTGCCATGAGACTGGTTGCTCAGCCTGGTGACAAACTCTATTGTCGTCTTACTGTGAATACTCAACTCCTTGCTCGAGTCTCCCACCTCCTCAAAGTTGGGAAAAACAATTTCCGACCTCCCCCGAAGGTTGATTCCTCGGTTGTGCGAATTGAGCCAAGGAAACCTCGCATTGAAGTTAAGCAGAAGGAATGGGATGGATTTTTGCGTATTTGTTTTAATAGAAAGAACAAGACACTTGGTTCAATTTTTAGGCAGAAGAATGTGATCTCCTTGCTGGAAAAGAACTACAAGATCGTGCAATCACTAAAACTCTCACAAGAAGGTTTAACAGAGGAAACCGATGCGAAAGTGGACTTCTCTGGTTTTGGCAACTCCGTGGAACATCAAGGCATGGGAATGGATGATGGATTAGATGAAGACGATGAAATGGAGATCGAGGGCGGTGATGGTGATGCTGAAGAGGTGCAATCTGAATTTAAGGACAAGGTTATGGGTGTTTTAAAAGAGGGAGATTTTGAAGAGAAGAGGTCGTCCAAGCTCAGCCTGCAGGAATTCCTATATTTGCTTTCTTTATTCAACAAAGCTGCCGTCTCCTTCTTCCTCCCATATAAGTGTGTCTTGTTCGTGCAATCCTTTTTCTTTGCCTCTGCGGCTGTAAGTCTTCGCTCAAGTTCCATTCCAATGGCTTCAGAGAAGAAGCTGGCGAACCCTATGAGGGAAATCAAGGTCCAGAAGCTCGTTCTCAATATCTCAGTGGGCGAGAGTGGAGATCGTCTCACCAGAGCTGCTAAGGTGTTGGAGCAGCTTAGTGGCCAGACACCTGTTTTCTCCAAAGCAAGGTATACTGTTCGTTCCTTTGGTATCAGAAGGAATGAAAAGATTGCATGCTATGTGACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTCTGAAGGTGAAGGAATATGAACTGCTGAGAAGAAACTTCAGTGATACAGGGTGCTTTGGATTTGGCATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCATCTACTGGTATCTATGGGATGGACTTCTATGTTGTTTTGGAGCGCCCTGGTTACCGTGTGGGACGCCGCCGCAGGTGTAAGGCACGTGTTGGGATCCAGCACCGGGTCACGAAGGACGATGCCATGAAGTGGTTCCAAGTGAAATACGAAGGAGTGATCCTGAACAAGGCCCAAACAATCTTTGGTTAG 1695 0.4555 MAGGKIKKEKGKPKQQHTPYQGGISFHKSKGQHILKNPLLVDSIVHKSGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEIDPRMVLELQRRFQGTPYSSRLKVIHGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKNVISLLEKNYKIVQSLKLSQEGLTEETDAKVDFSGFGNSVEHQGMGMDDGLDEDDEMEIEGGDGDAEEVQSEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAAVSFFLPYKCVLFVQSFFFASAAVSLRSSSIPMASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKAQTIFG 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0119 564 FunFam 60S ribosomal protein L11 383 556 - -
Lele11g0119 564 CDD AdoMet_MTases 56 138 - -
Lele11g0119 564 Hamap Ribosomal RNA small subunit methyltransferase A [rsmA]. 24 258 IPR011530 GO:0000179|GO:0006364
Lele11g0119 564 MobiDBLite consensus disorder prediction 1 23 - -
Lele11g0119 564 FunFam rRNA adenine N(6)-methyltransferase 26 211 - -
Lele11g0119 564 Pfam Ribosomal protein L5 391 444 IPR031310 -
Lele11g0119 564 ProSitePatterns Ribosomal RNA adenine dimethylases signature. 56 83 IPR020596 GO:0000154|GO:0000179|GO:0008649
Lele11g0119 564 SMART rADcneu6 40 209 IPR020598 GO:0000154|GO:0000179|GO:0008649
Lele11g0119 564 TIGRFAM ksgA: ribosomal RNA small subunit methyltransferase A 25 260 IPR011530 GO:0000179|GO:0006364
Lele11g0119 564 PANTHER DIMETHYLADENOSINE TRANSFERASE 8 349 IPR001737 -
Lele11g0119 564 MobiDBLite consensus disorder prediction 1 15 - -
Lele11g0119 564 Pfam Ribosomal RNA adenine dimethylase 25 240 IPR001737 -
Lele11g0119 564 Pfam ribosomal L5P family C-terminus 448 546 IPR031309 -
Lele11g0119 564 Gene3D Vaccinia Virus protein VP39 26 210 IPR029063 -
Lele11g0119 564 Gene3D - 212 355 - -
Lele11g0119 564 SUPERFAMILY RL5-like 391 555 IPR022803 -
Lele11g0119 564 Gene3D - 383 559 IPR022803 -
Lele11g0119 564 ProSitePatterns Ribosomal protein L5 signature. 421 437 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lele11g0119 564 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 255 IPR029063 -
Lele11g0119 564 ProSiteProfiles rRNA adenine N(6)-methyltransferase family profile. 26 285 IPR001737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0119 Lele-ChrLele11 1881240 1886004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0119 383 564 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.604 1.93e-125 364