Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0117 ATGATGGACAGAATCCATGGCAAAGGAGATGAATTAAAGAGGTCTCCATCGCAGCATTCGCCATCTTCAGCGGTTGCTGTAGCCATCAAGGGTAACAAGAAAAGCAAGCGTATGGTACAATGGGCACTGGATAAATTTGTGCCTGAGGGAAAAATTATGTTTAAGCTCATACATGTCCATTCTGCAGCTTCTTTTAAGAAGGAAATGGAGTGGCAAACAAGCGTAATGCTCCTACCTTACAAGAAAATGTGTGAGCAGAGAAAGGTTCATGTTGATGTTGTTGTGATTCAATCTGATGACGTAGAAACTGCAATAGCAGAGGAAGTTTCCAAGAGTTCTATAACCGACCTGGTTATAGGGGCTTCATCCCATGCCATATTTACTAGTAAACTGAAGGGTTTATCGGCAAAGATCTCGTTATGCACTCCGAGATTTTGTACAGTTTATGCTGTTTCCAAAGGGAAACTTTTTTCTTCACGGCTATCAGACATAGAGATTGATGGAAGCTTAGTAGATGACAGCAGTGAAACCAGTTGTTCAACCAATAGCTCATTAAACTCTGCATCCACCTCTCAGATAGATTATGGCTCAGTTGGATCTTATGCTTCTACACATTCCTCTTCCCTAGCGGCGCAGAGATATCAAGCTCTTTCAAACATTAATCAGACACGTCAGAGCACAAAATCTGGTTTAACTGAAAATAACCACTCAAGAAGCCATTCTCTAGATCTTGGCCTAGAGCAAACTGCTATGAGTTCTTCTACCACCAGAAACTCAGATATTGACTATGCTTTGAGCCGGGCCTCTAGCTGCAAAAGCAACCTATCAGATGGTGAATCTTGGAATTGTTATCAAAATTCCACCGTGGATGCACTGCTGTCAACTGTGTCACCATATAAACAGGAAAATTTTAACCTCGAGCTGGAAAAGTTGAGGCTTGAACTAACACATGCCCAAGGAATGCGCATGGTAGCTCAAAGACAGAGTATTTATGCATCACAAATGCTGAACAACCTAAGTAAGAAGAGAATAGAGGAATCCATGAAACTGAAGGAAGTTATTGCTAAGGAGGACATGGCCAAAAAGTTAATAATAAAGGAGAGAGAGAAATATGAGGCAGCAGAAAGAGAAGCTGCTTATTTGACAAGAAGTGCAGAAGAGGAAGCCATGGAAAGAATAGAAGCGGAGAAGAAAGCCGTCGAAGCCGCTAAAAGGAATGAAGATCTAGAAGATGCACTTAGTGGCTCCTTGCCTCAGTATAAGAAGATTAAATGGGACGAAATAGTTTCAGCTACTTCATCATTTTCTGAAGAGCTTAGAATTGGAAAGGGAGCTTGTGGAACAGTTTACAAGTGCAATTTGTATCATACACCCGTGGCAGTAAAAATTCTCCACTCTAATGAAGACCACATTATCAAACAACTCCAACAAGAGCTAGAAATACTGAGCAGAATTCGTCATCCGAATTTACTTCTCCTTCTTGGGGCATGCCCCGATCATGGATGCCTTGTGTATGAATACATGGAGAATGGTAGCTTAGAGGACAATTTACTCCAAAATAAAAGTAACATCTCAATTCCATGGTTCAAGAGGTACAACATTGCATGGGAAGTAGCCTCAGTTCTTGCCTTTCTTCATAGCTCGAAGCCGAAACCGATCATCCATCGCGATCTGAAACCGGCAAACATCTTGCTAGATCGAAATCTCGTGAGCAAGGTTGGTGATATTGGTCTTTCTACATTACTCCATTCAGAAACTTTATCTACAATGTTCAATGACACAGAACCTGTTGGGACACTCTCCTACATTGATCCTGAGTACCAAAGGACAGGGCTAATATCTCCTAAATCTGATGTTTATGCTTTTGGAATGGTGATCCTGCAATTGTTAACTGCAAAACCAGCTAGAGCACTGGCTCATTTAGTAGAAACAGCAATTGAAGAGGGAAATTTAGCAGAAATGTTGGATCCTAAGGCAGGGAATTGGCCACTTCAGGAGACTTTGGATTTGGCTCGATTAGGCCTAAGCTGCGCAGAACTTCGGCGTAGAGACCGGCCTGATTTGAAAGATCATGTTCTTCCCATTCTGGAGAGATTAAAAGAAGTTGCTGATAGGGCTCAGCACCATTCTGCTGCAGTTGTTACTGTTAAATCTAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGATTTGATGGAGAATCCTTGTGTTGCTGCTGATGGTTATACTTATGATTACATAGCAATTGAAACATGGCTGCAAACGAATGACAAATCACCAATGACAAATATGCCATTACCTCATAAGAATCTGATTCCGAATTACACGCTTCTATCTGCTATTATGGAGTGGAAATCCACACAAAACTGA 2373 0.4142 MMDRIHGKGDELKRSPSQHSPSSAVAVAIKGNKKSKRMVQWALDKFVPEGKIMFKLIHVHSAASFKKEMEWQTSVMLLPYKKMCEQRKVHVDVVVIQSDDVETAIAEEVSKSSITDLVIGASSHAIFTSKLKGLSAKISLCTPRFCTVYAVSKGKLFSSRLSDIEIDGSLVDDSSETSCSTNSSLNSASTSQIDYGSVGSYASTHSSSLAAQRYQALSNINQTRQSTKSGLTENNHSRSHSLDLGLEQTAMSSSTTRNSDIDYALSRASSCKSNLSDGESWNCYQNSTVDALLSTVSPYKQENFNLELEKLRLELTHAQGMRMVAQRQSIYASQMLNNLSKKRIEESMKLKEVIAKEDMAKKLIIKEREKYEAAEREAAYLTRSAEEEAMERIEAEKKAVEAAKRNEDLEDALSGSLPQYKKIKWDEIVSATSSFSEELRIGKGACGTVYKCNLYHTPVAVKILHSNEDHIIKQLQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDNLLQNKSNISIPWFKRYNIAWEVASVLAFLHSSKPKPIIHRDLKPANILLDRNLVSKVGDIGLSTLLHSETLSTMFNDTEPVGTLSYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPARALAHLVETAIEEGNLAEMLDPKAGNWPLQETLDLARLGLSCAELRRRDRPDLKDHVLPILERLKEVADRAQHHSAAVVTVKSRPPNHFICPILQDLMENPCVAADGYTYDYIAIETWLQTNDKSPMTNMPLPHKNLIPNYTLLSAIMEWKSTQN 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0117 790 PANTHER OS02G0152300 PROTEIN 25 784 - -
Lele11g0117 790 CDD RING-Ubox_WDSUB1_like 724 764 - -
Lele11g0117 790 SMART serkin_6 435 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0117 790 MobiDBLite consensus disorder prediction 1 15 - -
Lele11g0117 790 SMART Ubox_2 723 785 IPR003613 GO:0004842|GO:0016567
Lele11g0117 790 ProSiteProfiles U-box domain profile. 719 790 IPR003613 GO:0004842|GO:0016567
Lele11g0117 790 SUPERFAMILY Protein kinase-like (PK-like) 418 690 IPR011009 -
Lele11g0117 790 Pfam U-box domain 721 789 IPR003613 GO:0004842|GO:0016567
Lele11g0117 790 Coils Coil 357 377 - -
Lele11g0117 790 ProSiteProfiles Protein kinase domain profile. 435 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0117 790 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 720 790 IPR013083 -
Lele11g0117 790 MobiDBLite consensus disorder prediction 223 257 - -
Lele11g0117 790 Coils Coil 383 412 - -
Lele11g0117 790 CDD STK_N 25 154 - -
Lele11g0117 790 Gene3D HUPs 18 133 IPR014729 -
Lele11g0117 790 MobiDBLite consensus disorder prediction 1 24 - -
Lele11g0117 790 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 131 - -
Lele11g0117 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Lele11g0117 790 MobiDBLite consensus disorder prediction 171 189 - -
Lele11g0117 790 Gene3D Transferase(Phosphotransferase) domain 1 508 719 - -
Lele11g0117 790 Pfam Protein kinase domain 437 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0117 790 MobiDBLite consensus disorder prediction 170 189 - -
Lele11g0117 790 SUPERFAMILY RING/U-box 718 788 - -
Lele11g0117 790 Gene3D Phosphorylase Kinase; domain 1 414 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0117 Lele-ChrLele11 1859989 1865265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0117 22 789 U-box Gene Family AT4G25160 47.919 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele11g0117 Pkinase 1.6e-38 CL0016