Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0113 ATGGCGACTTGGTGTCCAAGTTGCTCCAAGTTCACATCAGTTTCTTTTCTTCCACACTCCTCTCTCGTACCTTCCCTCTTCAGTGCCCGTTCTAGTTCTGTGAGGCCCGTTCATCTCCGTTGTTTCTATAAGCGTCAAAGACTTTGGCTTCGATCAAGCCGTCGTTGTGGTCCTCTACCAGCTACGTCATGCAGGAATTCTGAGTCTGTAGAACTGCGAGAAGCTCGGAATGCTGTTTCAAAACTTCTTCAAGAATTCGGGGTGTCTGAGGAGGAACCAATTATATTACAAACACTTGCAACACTCATTCTTAAGGTTAAGTGTATGAAGGAATTGTTCTTTTCTGGCAGTGAAAGTTATGAGTTCTCAGTCAGAAGGGCTCGCAATATGATGATGCAGATATCAATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTGAACATGTTGAATTCCAGCGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCGGTCTACTTTTGTTATCAGTAAAGTTGCACATGAAACCGTTAGTGGAGTTTCTTGAGAGTGTTGGAATCCAAAGTGATCTCATCACAAATATACAGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAACTCGAGTACTAGCCTTGAAAGAGGTTGAAGCAAGGCGTGGAGGTTTGAACATGTTGAATTCCAGCGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCGGTCTACTTTTGTTATCAGTAAAGTTGCACATGAAACCGTTAGTGGAGTTTCTTGAGAGTGTTGGAATCCAAAGTGATCTCATCACAAATATACAGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAACTCGAGTACTAGCCTTGAAAGAGGTTGAAGCAAGGCGTGGAGGTTTGAACATGTTGAATTCCAGCGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCGGTCTACTTTTGTTATCAGTAAAGTTGCACATGAAACCGTTAGTGGAGTTTCTTGAGAGTGTTGGAATCCAAAGTGATCTCATCACAAATATACAGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAACTCGAGTACTAGCCTTGAAAGAGGTTGAAGCAAGGCGTGGAGGTTTGAACATGTTGAATTCCAGCGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCGGTCTACTTTTGTTATCAGTAAAGTTGCACATGAAACCGTTAGTGGAGTTTCTTGAGAGTGTTGGAATCCAAAGTGATCTCATCACAAATATACAGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAACTCGAGTACTAGCCTTGAAAGAGGTCCCCAAGACATTCGTTGATCGTGCAATCAAAAGCTGGCCTCATATACTGGGTTCTTCATCTAGCAAGCTAAAGCTGATGGTTGATCAGTTTGGTGAAATAGGAGTTCAATACAAGCAGTTGGGTCAAGTTATTGCTAAAAGTCCTCCGCTACTGTTTGATAGACAAACAATCGGGACAATACTGGCTCGTTGTCCTGAAATCTTTGCTGCTTGCCCTACTAAGGTTCTCCAGAGAAAGATTGAGTTCCTACATGGTATTGTTGTTTCTGAAATTCACCTTCCTTGGGTTATAAAAAAGTATCCAGAACTTCTTGTGTCCGACCCAGACAGAATTATGCTACCTAGGGTGCCTCTGGGTATCCCTGCAGTGATTGTTTGCTGTTTTGAACATTGTTGGGCAAGAAAGGAAAATGTTGTGTCATTTGATCTCGTGGCCTCGTCATTGTGCAGCATTGAGGAGGTTCTGAGACCCAAAGTAGAATTCCTGGTGAACACAATGGAGAGGCCAGTGAGGGGCGTGGTGGGGTACCCCAGGTATTTTAGCTATTCTTTAGAGAACAAGATAAAGCCAAGATTTTGGGTTCTTAAGGGAAGGAATATTGAGTGTAGTTTGAAGGATACGTTGGCAAAAAATGACGAAGAATTTGCTGCTGAATTTATGAATCTCCCATGA 2100 0.4095 MATWCPSCSKFTSVSFLPHSSLVPSLFSARSSSVRPVHLRCFYKRQRLWLRSSRRCGPLPATSCRNSESVELREARNAVSKLLQEFGVSEEEPIILQTLATLILKVKCMKELFFSGSESYEFSVRRARNMMMQISIPIDEDLQQTLSFFEKVEARRGGLNMLNSSDAAFDFLIESFPGLLLLSVKLHMKPLVEFLESVGIQSDLITNIQLTFPPSLLWNIEVFKTRVLALKEVEARRGGLNMLNSSDAAFDFLIESFPGLLLLSVKLHMKPLVEFLESVGIQSDLITNIQLTFPPSLLWNIEVFKTRVLALKEVEARRGGLNMLNSSDAAFDFLIESFPGLLLLSVKLHMKPLVEFLESVGIQSDLITNIQLTFPPSLLWNIEVFKTRVLALKEVEARRGGLNMLNSSDAAFDFLIESFPGLLLLSVKLHMKPLVEFLESVGIQSDLITNIQLTFPPSLLWNIEVFKTRVLALKEVPKTFVDRAIKSWPHILGSSSSKLKLMVDQFGEIGVQYKQLGQVIAKSPPLLFDRQTIGTILARCPEIFAACPTKVLQRKIEFLHGIVVSEIHLPWVIKKYPELLVSDPDRIMLPRVPLGIPAVIVCCFEHCWARKENVVSFDLVASSLCSIEEVLRPKVEFLVNTMERPVRGVVGYPRYFSYSLENKIKPRFWVLKGRNIECSLKDTLAKNDEEFAAEFMNLP 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0113 699 Pfam mTERF 409 526 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 Pfam mTERF 528 692 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 PANTHER CGI-12 PROTEIN-RELATED 333 697 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 646 677 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 482 512 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 614 645 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 332 363 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 SMART mt_12 534 565 IPR003690 GO:0003690|GO:0006355
Lele11g0113 699 Coils Coil 65 92 - -
Lele11g0113 699 Gene3D Transcription termination factor 3, mitochondrial 530 699 IPR038538 -
Lele11g0113 699 Gene3D Transcription termination factor 3, mitochondrial 238 395 IPR038538 -
Lele11g0113 699 Gene3D Transcription termination factor 3, mitochondrial 400 529 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0113 Lele-ChrLele11 1837023 1841900 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele11g0113 mTERF 2.3e-50 No_clan