Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0111 ATGAAACTGAGAGAGTCAGAAATATTTGCGGAAGAGGAAGATGTTGGTGGAGGAACATACATAAAGAAGGGACCATGGAGTGCTGAAGAAGATGAGATTCTGATGAGACATGTCAAGAAAAACGGTCCAAGGGATTGGAGCTCCATTCGATCCAAAGGCTTGCTTCCCCGCACCGGGAAATCATGCCGGCTCCGATGGGTTAACAAGCTTAGACCCAACTTGAAGACAGGGTGCAAGTTTTCAGCAGAGGAAGAAAGAGTGGTGATAGAATTGCAGGCAGAGTTTGGTAACAAGTGGGCGAAAATAGCGACATGCTTAGAAGGAAGAACAGACAACGATGTGAAGAATTTCTGGAGCAGTAGGAAAAAGAGGTTTGAGAGAATGTTGCAGAAACCATCCCCGCCTTCATCATCATCGTCAAAGCCAAACAAAAATAACAAAGCAACAATATCTCATATAATTCATCACCCACCATCACCAGTAGTTGAAGAGGTTCCTGCCTCATGCAGTTCAAATCATGTGGAGCAAAACCCATCAGGCAATAATAACAAGTTTCAGATGGTTGATGTAACTGGGGAGATGAAGTTTCAGAATGTGAAAGCAGAGGAGGCCACTCCCCTTCACATGGTTCCATCATTTGAGTCGTCTTCACCAGAGTACACCTTTTCTCAAGTTCTTCTTCCTGATGAGTCCCACCAAGTGGACTGCGGCGGACTCTTGACGCCACCGGTCTGCCATGGCCTGGTCGATCTGGAGCCTTTCGATGCCACCTTTCTCGACGTTTTCGAGCAGCACAAGAAGCCAGGTCTCGCATTGGGAGGGATTGCTCAGAGTTCAATTCCAGCAAATGGCTTCTTTGAGGACTTCCCAAGTGACATATTTGATTACTTTGAAGAACTTCCTAACTCATTAGACATATGA 921 0.4582 MKLRESEIFAEEEDVGGGTYIKKGPWSAEEDEILMRHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERVVIELQAEFGNKWAKIATCLEGRTDNDVKNFWSSRKKRFERMLQKPSPPSSSSSKPNKNNKATISHIIHHPPSPVVEEVPASCSSNHVEQNPSGNNNKFQMVDVTGEMKFQNVKAEEATPLHMVPSFESSSPEYTFSQVLLPDESHQVDCGGLLTPPVCHGLVDLEPFDATFLDVFEQHKKPGLALGGIAQSSIPANGFFEDFPSDIFDYFEELPNSLDI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0111 306 Pfam Myb-like DNA-binding domain 79 119 IPR001005 -
Lele11g0111 306 Pfam Myb-like DNA-binding domain 23 68 IPR001005 -
Lele11g0111 306 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Lele11g0111 306 ProSiteProfiles Myb-like domain profile. 79 122 IPR001005 -
Lele11g0111 306 MobiDBLite consensus disorder prediction 131 146 - -
Lele11g0111 306 MobiDBLite consensus disorder prediction 125 146 - -
Lele11g0111 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 126 IPR017930 -
Lele11g0111 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 74 IPR017930 -
Lele11g0111 306 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Lele11g0111 306 PANTHER TRANSCRIPTION FACTOR DUO1 17 303 - -
Lele11g0111 306 CDD SANT 25 70 IPR001005 -
Lele11g0111 306 SMART sant 22 72 IPR001005 -
Lele11g0111 306 SMART sant 76 124 IPR001005 -
Lele11g0111 306 FunFam MYB transcription factor 23 75 - -
Lele11g0111 306 FunFam Transcription factor GAMYB 78 151 - -
Lele11g0111 306 Gene3D - 78 152 - -
Lele11g0111 306 CDD SANT 79 118 IPR001005 -
Lele11g0111 306 Gene3D - 22 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0111 Lele-ChrLele11 1831931 1833201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0111 10 179 MYB Transcription Factor Family AT4G26930 44.706 1.99e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele11g0111 Myb_DNA-binding 1.4e-11 CL0123