Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0094 ATGTTGGCCTGCACGTGTTATTCTGTCTTGTGCTTCAGTTTGGCCTCGAGATTCTCCAATCCAATGCTATATCAAAAGGAACAGAGAAACTTCTATTTATTTGTTGTACTTGGGTCCAGAGCCATGTCTAATTTCTTGGATTACAAGTTCAGTATATTTGACCGTCAACTTCCACAACATGAATTTAATTATCAACCCATCAACAATCAATTTAATCATATAAGATCTCACTCTAACAAGCTACGTAAGTACAACGTTGGTACCATTACGTACAAGACCAACATGGTTCACAAAAGCAGATTTCACAGAATCAGAGGTCCAACAAAAATGGACTGCACAATCATGACCGTGAACTCGAACTCTATGGTGATGGAGCCTCTGAAACTTAAAAGCAAGGATCCATTGTGGGATGAACAGTGCCAACTCTGGCACCTCAACTTCAGACATCATGATACATTGGCATATTCTAATTTCCAGCTTGTTTCTGCCGCAGATGAAGAACATGAAAAGCGAGTGGAAGAGGAAGATGCTGAGATTCTGTCTTGTGCTTCAGTTTGTAAGTCATGGAGAGCTACCACTAAGGATATTGTTAAGACTCCTGAACTATCTGGACGACTCATTTTTCCCATCATTGAAGCAAGGCCTCGAGATTCTCCAATCCAATGCTATATCAAAATGAACAGGGAATCTTCTATTTGTTTGTTGTACTTGGGTCCAAAGCCATCAGAGAACAGGAATGATAGGTTGTTGTTGGCTGCCAAAGGAGAACAAAGTCAGGCTTCACAACAAGAAAAACATAAAGCTGGTGGTGGAGGAGTTGTTAAACCCAAGAAGAACAATCAATTGAATCATGGATCATTATTTCACTACTCTAACATTAATGTGTCTTTAATTGAATACAACGTTGGTACCATTACATACAAGATCTACAAGATTGAACGCTTAGGGGGCACAATTGAGGACGGTCCAAGAAAAATGAAGTGCACCATCCTGATGAACACGATGAACTCATCCAACTCTATTCTGAAACTTGAAAGCAAGGATCCCAAATGTGATCCCGACTACCTATTTACATTACACTGGCGCCTCAACTTCAGACACCATGGTACAATATTGCCATTTGCTAATTTCCAGTTTGTTTCTGCTCATGAAAAGATAATCTTGGAATTTGCTAAGATTGGAGCAGACTCGTTTGTTATGGTTTACTGTTATCCACTCTCAGCATTTCAAGCCTTCTCCATCGTCTGCCTCAGCAACTTTCTCGCTGACGTCTCAACCTGCTTCTGCGATCGATTGAGATTATAA 1305 0.4031 MLACTCYSVLCFSLASRFSNPMLYQKEQRNFYLFVVLGSRAMSNFLDYKFSIFDRQLPQHEFNYQPINNQFNHIRSHSNKLRKYNVGTITYKTNMVHKSRFHRIRGPTKMDCTIMTVNSNSMVMEPLKLKSKDPLWDEQCQLWHLNFRHHDTLAYSNFQLVSAADEEHEKRVEEEDAEILSCASVCKSWRATTKDIVKTPELSGRLIFPIIEARPRDSPIQCYIKMNRESSICLLYLGPKPSENRNDRLLLAAKGEQSQASQQEKHKAGGGGVVKPKKNNQLNHGSLFHYSNINVSLIEYNVGTITYKIYKIERLGGTIEDGPRKMKCTILMNTMNSSNSILKLESKDPKCDPDYLFTLHWRLNFRHHGTILPFANFQFVSAHEKIILEFAKIGADSFVMVYCYPLSAFQAFSIVCLSNFLADVSTCFCDRLRL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0094 434 MobiDBLite consensus disorder prediction 254 277 - -
Lele11g0094 434 PANTHER TUBBY-RELATED 42 164 - -
Lele11g0094 434 Pfam Tub family 337 420 IPR000007 -
Lele11g0094 434 Pfam Tub family 124 170 IPR000007 -
Lele11g0094 434 Pfam Tub family 42 121 IPR000007 -
Lele11g0094 434 Gene3D Tubby Protein; Chain A 36 180 IPR025659 -
Lele11g0094 434 Gene3D Tubby Protein; Chain A 209 420 IPR025659 -
Lele11g0094 434 SUPERFAMILY Tubby C-terminal domain-like 211 420 IPR025659 -
Lele11g0094 434 SUPERFAMILY Tubby C-terminal domain-like 42 167 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0094 Lele-ChrLele11 1709415 1714169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0094 171 420 TUB Transcription Factor Family AT2G18280 32.831 1.75e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Lele11g0094 Tub 2.9e-16 CL0395