Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0091 ATGGAGAGTTTCATTAGCGGATCATCGTCATCGTCAAGGCCGATCCATGTTTATTTAAGTTTCAAAGGAGACGATAAAACTTGCAGGTTCACAGATAGACTTTGGGCGGCACTTGAAAGTGACGACATAAACACCTTTTGGGATGACAAGAAGCTTCACCCACCTGATTCCATCTTTCTCCCACGCCACTTTCTCAAAGCAATTCAACAATCCAACATTTCCATTGTCGTCTTCTCCAAAAATTATGCTTCTTCTATATGGTGCCTTGAGGAGCTCTCTGAGATCGCTGCGCGCATTCATGAGCAGCGATATAGTGTTTTCCCAGTTTTCTATGATGTAGATCCATCTGAAGTACAAAACCAGAGTAATTCTTTCCAAAAAGCTTTCGCTGAACATGAACAAAGGTTCACAGCAAATTCACGCAAGGTAAACAGCTGGAGGTTAGCAATGAAACAAGTGGCCAATCTCTCTGGTTGGCATGCATCTCAAGAGTCAGGGGCACAAGTTATAGATGACATAATAATAAAGGTCAAGAAAAAAATGCGTGAATCAGTTTATGTTGATGTAGATCTGGTGGGGATGAAACCTCGAGTGAAAGAAGTAGAAGAGCTTCTAGATTTGGGTTCAAATGATGAAATTAGAGTAGTGGGCATTTGTGGGGAGGAGATTAAATTTGTGGAAGGAATTTTGGGTAGTGCTCATACAGTTTCTTCAGATAGAGACCGTCCAGTGAAGTACAATATGCAACTTTTGATTGAGAAATCACTCATGGCCATTATGGATCAAAACATACAAATGCATGGTTTACTGCAAGAAATGGGAAAAGAAATTGTGCGGCAGGAATTTCCTTGTCAACCAGAGGAGTGGAGTAGATTATGGGATTTTGATGATATTTATGGCGCTACTCTTAAAGTTGAAGCAATAGTCTTGAAACTAGAAGATTCACAGGGAAGTACATTGAAAGTTGAAGGTTTATCACGCATGAGCAATCTGAGGCTACTCATATTTCGCAACGTGAAATTTTCTGGGGTCCTAAAACATCTTTCAAGCCATCTCCGATATATTTCATGGCACCAATATCCTTTCACTTCTCTGCCGTCAAATTTTGTCCCATATTGTCTTAGAGAATTGATTTTGCCTGATAGTTGCATCACAAGTGTATGGGATGAAGAAAAGGTTTCACCTCGTTCAAACGAAGCAGATGATGAAGGTTATTGTCTTTATCAACAGTCATTCCCTTGCTTGAGAAACTTGAATCTTAGTGGCTCCAAAGATTTAACCAAGATGCCAAATTTCATGGTATTCATAAGTCTTGAGAGACTAGATCTTGAAGGATGCACTAAATTATCACACCTTGATTCATCTATTGTTTATCTTTCAAGGCTCAAATTCTTAAATTTGAGAAATTGTACTGACCTTGTACAAATTAATTTGATTCGTTTAGTGCTTTCGGAATTGGAGGTGGAGGCTGATGCGTACACAAGTCGAATGGATTAG 1497 0.3941 MESFISGSSSSSRPIHVYLSFKGDDKTCRFTDRLWAALESDDINTFWDDKKLHPPDSIFLPRHFLKAIQQSNISIVVFSKNYASSIWCLEELSEIAARIHEQRYSVFPVFYDVDPSEVQNQSNSFQKAFAEHEQRFTANSRKVNSWRLAMKQVANLSGWHASQESGAQVIDDIIIKVKKKMRESVYVDVDLVGMKPRVKEVEELLDLGSNDEIRVVGICGEEIKFVEGILGSAHTVSSDRDRPVKYNMQLLIEKSLMAIMDQNIQMHGLLQEMGKEIVRQEFPCQPEEWSRLWDFDDIYGATLKVEAIVLKLEDSQGSTLKVEGLSRMSNLRLLIFRNVKFSGVLKHLSSHLRYISWHQYPFTSLPSNFVPYCLRELILPDSCITSVWDEEKVSPRSNEADDEGYCLYQQSFPCLRNLNLSGSKDLTKMPNFMVFISLERLDLEGCTKLSHLDSSIVYLSRLKFLNLRNCTDLVQINLIRLVLSELEVEADAYTSRMD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0091 498 Gene3D - 8 187 IPR035897 -
Lele11g0091 498 Pfam TIR domain 16 183 IPR000157 GO:0007165
Lele11g0091 498 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 159 IPR035897 -
Lele11g0091 498 SMART till_3 14 156 IPR000157 GO:0007165
Lele11g0091 498 SUPERFAMILY L domain-like 285 478 - -
Lele11g0091 498 Gene3D Ribonuclease Inhibitor 303 489 IPR032675 -
Lele11g0091 498 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Lele11g0091 498 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 220 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0091 Lele-ChrLele11 1684521 1687343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0091 251 476 WRKY Transcription Factor Family AT4G12020 36.327 2.24e-28 118